Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC090617.10-201ENST00000624308 134 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 AL008636.1-201ENST00000625038 1018 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 MIR103A2-201ENST00000362154 78 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 SNORA25.3-201ENST00000363205 127 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 SNORD116-1-201ENST00000384335 95 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 MIR190B-201ENST00000401119 79 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 EIF1P2-201ENST00000428233 350 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 AL162725.1-201ENST00000435405 301 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.5□□□□□ -2.33
TREX1Q9NSU2 AC114811.1-201ENST00000507207 168 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.5□□□□□ -2.33
TREX1Q9NSU2 AL358944.1-201ENST00000528537 144 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 AC131055.1-201ENST00000584626 316 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 AC007014.2-201ENST00000615581 479 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.5□□□□□ -2.33
TREX1Q9NSU2 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 7SK.10-201ENST00000621414 298 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 AC010487.4-201ENST00000637027 61 ntBASIC0.5□□□□□ -2.33
TREX1Q9NSU2 RNU6-1013P-201ENST00000384180 107 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 RNU6-1145P-201ENST00000384246 107 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 RNU6-842P-201ENST00000384269 107 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 MIR452-201ENST00000385020 85 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 SNORD99-201ENST00000408612 74 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 RNU2-16P-201ENST00000410712 136 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 RNU6-373P-201ENST00000411247 98 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.49□□□□□ -2.33
TREX1Q9NSU2 AC092628.1-201ENST00000436250 252 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 AC093019.1-201ENST00000443135 252 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 AC074133.1-201ENST00000515696 183 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 RNU6-864P-201ENST00000516256 108 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 RNU6-1088P-201ENST00000516850 104 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 AC023442.1-201ENST00000531247 422 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 AF250324.2-201ENST00000608299 610 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 AC093913.1-201ENST00000614178 329 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 AC100810.6-201ENST00000638068 285 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.49□□□□□ -2.33
TREX1Q9NSU2 RNU6-117P-201ENST00000365415 107 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 Y_RNA.364-201ENST00000365532 101 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 Y_RNA.557-201ENST00000384680 107 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 MIR520C-201ENST00000385005 87 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 MIR516B2-201ENST00000385190 85 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 RNU6-700P-201ENST00000391043 107 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 MIR1298-201ENST00000408783 112 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 AC009161.1-201ENST00000417306 376 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.48□□□□□ -2.33
TREX1Q9NSU2 DLGAP5P1-201ENST00000430307 464 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 RNU6-625P-201ENST00000459412 107 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 AC113410.1-201ENST00000505029 247 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 RNU6-506P-201ENST00000516553 94 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 AC109810.1-201ENST00000534066 224 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 AC245505.1-201ENST00000556398 224 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.48□□□□□ -2.33
TREX1Q9NSU2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.48□□□□□ -2.33
TREX1Q9NSU2 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 SEPT14P17-201ENST00000617978 177 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 AC027279.3-201ENST00000625055 122 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 MIR3674-201ENST00000636576 68 ntBASIC0.48□□□□□ -2.33
TREX1Q9NSU2 SNORD114-23-201ENST00000363536 72 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 MIR193B-201ENST00000384907 83 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 MIR936-201ENST00000401264 98 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 RNA5SP511-201ENST00000410487 115 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.47□□□□□ -2.33
TREX1Q9NSU2 AC005534.2-201ENST00000431047 433 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 UBE2V1P7-201ENST00000446395 340 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 ELOCP24-201ENST00000456370 334 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 RNU6-1132P-201ENST00000459214 107 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 U7.7-201ENST00000459276 60 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 RNU6-566P-201ENST00000516790 107 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 RNU6-1314P-201ENST00000517139 104 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 AC109635.3-201ENST00000529536 185 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 AC025627.3-201ENST00000582078 182 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 Z83818.1-201ENST00000603584 150 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 AC009229.3-201ENST00000608056 282 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 MIR3662-201ENST00000637030 95 ntBASIC0.47□□□□□ -2.33
TREX1Q9NSU2 RNU6-454P-201ENST00000364292 107 ntBASIC0.46□□□□□ -2.34
TREX1Q9NSU2 RNU6-1297P-201ENST00000384415 104 ntBASIC0.46□□□□□ -2.34
TREX1Q9NSU2 RNU6-831P-201ENST00000384548 107 ntBASIC0.46□□□□□ -2.34
TREX1Q9NSU2 RNY1P4-201ENST00000384595 115 ntBASIC0.46□□□□□ -2.34
TREX1Q9NSU2 Y_RNA.559-201ENST00000384686 107 ntBASIC0.46□□□□□ -2.34
TREX1Q9NSU2 AL354751.2-201ENST00000415471 210 ntBASIC0.46□□□□□ -2.34
TREX1Q9NSU2 RPL23AP50-201ENST00000434149 455 ntBASIC0.46□□□□□ -2.34
TREX1Q9NSU2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.46□□□□□ -2.34
TREX1Q9NSU2 AC067940.1-201ENST00000458411 300 ntBASIC0.46□□□□□ -2.34
TREX1Q9NSU2 Y_RNA.2-201ENST00000362330 96 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 Y_RNA.402-201ENST00000383972 102 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 Y_RNA.473-201ENST00000384333 102 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
TREX1Q9NSU2 MIR1185-1-201ENST00000408598 86 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 RNU6-994P-201ENST00000410507 111 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 MLLT10P1-201ENST00000418346 262 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 SUMO1P2-201ENST00000452524 304 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 SNORD5.1-201ENST00000458800 75 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.45□□□□□ -2.34
TREX1Q9NSU2 SNORA40.9-201ENST00000515895 93 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 RNU7-41P-201ENST00000515917 61 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
TREX1Q9NSU2 MIR1273G-201ENST00000577677 100 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 481.5 ms