Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 AC005908.1-201ENST00000468701 347 ntBASIC1.47□□□□□ -2.17
Q9N2K0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.47□□□□□ -2.17
Q9N2K0 AC099513.1-201ENST00000490423 301 ntBASIC1.47□□□□□ -2.17
Q9N2K0 AC015720.1-201ENST00000565251 277 ntBASIC1.47□□□□□ -2.17
Q9N2K0 MIR4769-201ENST00000584126 77 ntBASIC1.47□□□□□ -2.17
Q9N2K0 MIR376A1-201ENST00000616574 68 ntBASIC1.47□□□□□ -2.17
Q9N2K0 AC073349.3-201ENST00000617616 186 ntBASIC1.47□□□□□ -2.17
Q9N2K0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.46□□□□□ -2.18
Q9N2K0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.46□□□□□ -2.18
Q9N2K0 RNU6-450P-201ENST00000364654 107 ntBASIC1.46□□□□□ -2.18
Q9N2K0 SNORA33.2-201ENST00000365413 134 ntBASIC1.46□□□□□ -2.18
Q9N2K0 Y_RNA.422-201ENST00000384054 114 ntBASIC1.46□□□□□ -2.18
Q9N2K0 RNA5SP511-201ENST00000410487 115 ntBASIC1.46□□□□□ -2.18
Q9N2K0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.46□□□□□ -2.18
Q9N2K0 AC003989.2-201ENST00000440224 169 ntBASIC1.46□□□□□ -2.18
Q9N2K0 AC245517.4-201ENST00000448601 281 ntBASIC1.46□□□□□ -2.18
Q9N2K0 RPS29P11-201ENST00000496507 171 ntBASIC1.46□□□□□ -2.18
Q9N2K0 RNU6-1143P-201ENST00000516125 104 ntBASIC1.46□□□□□ -2.18
Q9N2K0 RNU6-966P-201ENST00000516479 104 ntBASIC1.46□□□□□ -2.18
Q9N2K0 RNU6-63P-201ENST00000516690 95 ntBASIC1.46□□□□□ -2.18
Q9N2K0 SNORA40.15-201ENST00000516884 107 ntBASIC1.46□□□□□ -2.18
Q9N2K0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.46□□□□□ -2.18
Q9N2K0 DEFB122-202ENST00000569013 197 ntBASIC1.46□□□□□ -2.18
Q9N2K0 AC015688.6-201ENST00000577737 104 ntBASIC1.46□□□□□ -2.18
Q9N2K0 MIR4285-201ENST00000581001 85 ntBASIC1.46□□□□□ -2.18
Q9N2K0 MIR4300-201ENST00000581016 96 ntBASIC1.46□□□□□ -2.18
Q9N2K0 RAC1P9-201ENST00000604990 392 ntBASIC1.46□□□□□ -2.18
Q9N2K0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.46□□□□□ -2.18
Q9N2K0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.46□□□□□ -2.18
Q9N2K0 AC095038.3-201ENST00000634439 195 ntBASIC1.46□□□□□ -2.18
Q9N2K0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.46□□□□□ -2.18
Q9N2K0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
Q9N2K0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.45□□□□□ -2.18
Q9N2K0 SNORA1B-201ENST00000362535 133 ntBASIC1.45□□□□□ -2.18
Q9N2K0 SNORD114-1-201ENST00000362705 72 ntBASIC1.45□□□□□ -2.18
Q9N2K0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.45□□□□□ -2.18
Q9N2K0 RNU6-639P-201ENST00000384074 107 ntBASIC1.45□□□□□ -2.18
Q9N2K0 Y_RNA.456-201ENST00000384232 111 ntBASIC1.45□□□□□ -2.18
Q9N2K0 MIR9-3-201ENST00000385084 90 ntBASIC1.45□□□□□ -2.18
Q9N2K0 RNU6-855P-201ENST00000410395 104 ntBASIC1.45□□□□□ -2.18
Q9N2K0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.45□□□□□ -2.18
Q9N2K0 POLR2KP2-201ENST00000438155 177 ntBASIC1.45□□□□□ -2.18
Q9N2K0 STAG3L5P-204ENST00000443759 179 ntBASIC1.45□□□□□ -2.18
Q9N2K0 RNA5SP182-201ENST00000516064 82 ntBASIC1.45□□□□□ -2.18
Q9N2K0 RNU6-897P-201ENST00000517135 105 ntBASIC1.45□□□□□ -2.18
Q9N2K0 AL442663.2-201ENST00000554385 511 ntBASIC1.45□□□□□ -2.18
Q9N2K0 AC110588.1-201ENST00000559699 137 ntBASIC1.45□□□□□ -2.18
Q9N2K0 AC136932.1-201ENST00000574771 208 ntBASIC1.45□□□□□ -2.18
Q9N2K0 AC005972.2-201ENST00000604690 348 ntBASIC1.45□□□□□ -2.18
Q9N2K0 AC004832.4-201ENST00000608952 331 ntBASIC1.45□□□□□ -2.18
Q9N2K0 MIR8063-201ENST00000621930 81 ntBASIC1.45□□□□□ -2.18
Q9N2K0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
Q9N2K0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Q9N2K0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Q9N2K0 MIR302D-201ENST00000362275 68 ntBASIC1.44□□□□□ -2.18
Q9N2K0 RNU4-90P-201ENST00000362773 141 ntBASIC1.44□□□□□ -2.18
Q9N2K0 SNORD113-8-201ENST00000363497 74 ntBASIC1.44□□□□□ -2.18
Q9N2K0 Y_RNA.216-201ENST00000364205 93 ntBASIC1.44□□□□□ -2.18
Q9N2K0 Y_RNA.368-201ENST00000365547 113 ntBASIC1.44□□□□□ -2.18
Q9N2K0 MIR513A1-201ENST00000385138 129 ntBASIC1.44□□□□□ -2.18
Q9N2K0 MIR764-201ENST00000390811 85 ntBASIC1.44□□□□□ -2.18
Q9N2K0 SNORD115-46-201ENST00000390982 71 ntBASIC1.44□□□□□ -2.18
Q9N2K0 RNU4-30P-201ENST00000410245 143 ntBASIC1.44□□□□□ -2.18
Q9N2K0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.44□□□□□ -2.18
Q9N2K0 AL591806.2-201ENST00000433122 173 ntBASIC1.44□□□□□ -2.18
Q9N2K0 RPS20P10-201ENST00000451209 253 ntBASIC1.44□□□□□ -2.18
Q9N2K0 AC233266.1-201ENST00000454518 96 ntBASIC1.44□□□□□ -2.18
Q9N2K0 AL049830.1-201ENST00000468034 425 ntBASIC1.44□□□□□ -2.18
Q9N2K0 AC108210.2-201ENST00000503681 201 ntBASIC1.44□□□□□ -2.18
Q9N2K0 AC079140.2-201ENST00000506193 142 ntBASIC1.44□□□□□ -2.18
Q9N2K0 RNU6-237P-201ENST00000515985 71 ntBASIC1.44□□□□□ -2.18
Q9N2K0 RNU6-397P-201ENST00000516226 104 ntBASIC1.44□□□□□ -2.18
Q9N2K0 RNU6-970P-201ENST00000516312 107 ntBASIC1.44□□□□□ -2.18
Q9N2K0 RNU6-1046P-201ENST00000516538 107 ntBASIC1.44□□□□□ -2.18
Q9N2K0 RNU6-1291P-201ENST00000516591 104 ntBASIC1.44□□□□□ -2.18
Q9N2K0 AC113195.1-201ENST00000579952 141 ntBASIC1.44□□□□□ -2.18
Q9N2K0 MIR4680-201ENST00000580906 66 ntBASIC1.44□□□□□ -2.18
Q9N2K0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.44□□□□□ -2.18
Q9N2K0 AC242852.1-201ENST00000612151 96 ntBASIC1.44□□□□□ -2.18
Q9N2K0 AC244015.1-201ENST00000622301 99 ntBASIC1.44□□□□□ -2.18
Q9N2K0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Q9N2K0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
Q9N2K0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
Q9N2K0 SNORD81.1-201ENST00000363064 77 ntBASIC1.43□□□□□ -2.18
Q9N2K0 SNORD1A-201ENST00000364968 72 ntBASIC1.43□□□□□ -2.18
Q9N2K0 RNA5SP363-201ENST00000365072 115 ntBASIC1.43□□□□□ -2.18
Q9N2K0 Y_RNA.341-201ENST00000365341 102 ntBASIC1.43□□□□□ -2.18
Q9N2K0 Y_RNA.383-201ENST00000383855 97 ntBASIC1.43□□□□□ -2.18
Q9N2K0 SNORD116-13-201ENST00000384408 92 ntBASIC1.43□□□□□ -2.18
Q9N2K0 RNU6-136P-201ENST00000384663 107 ntBASIC1.43□□□□□ -2.18
Q9N2K0 MTND4LP30-201ENST00000454092 297 ntBASIC1.43□□□□□ -2.18
Q9N2K0 snoU13.23-201ENST00000458863 104 ntBASIC1.43□□□□□ -2.18
Q9N2K0 Y_RNA.638-201ENST00000459374 113 ntBASIC1.43□□□□□ -2.18
Q9N2K0 HMGN1P10-201ENST00000474557 553 ntBASIC1.43□□□□□ -2.18
Q9N2K0 RNU7-116P-201ENST00000516940 62 ntBASIC1.43□□□□□ -2.18
Q9N2K0 DEFB117-201ENST00000602356 141 ntBASIC1.43□□□□□ -2.18
Q9N2K0 PRR13P7-201ENST00000605538 430 ntBASIC1.43□□□□□ -2.18
Q9N2K0 Y_RNA.222-201ENST00000364264 102 ntBASIC1.42□□□□□ -2.18
Q9N2K0 RNU6-1323P-201ENST00000384025 107 ntBASIC1.42□□□□□ -2.18
Q9N2K0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms