Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
NANOGQ9H9S0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
NANOGQ9H9S0 Y_RNA.26-201ENST00000362539 101 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 RNU6-1266P-201ENST00000362794 105 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 Y_RNA.143-201ENST00000363520 106 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 RNU6-1175P-201ENST00000365200 107 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 SNORD116-13-201ENST00000384408 92 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 RNA5SP323-201ENST00000391094 133 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 AL031003.1-201ENST00000404229 172 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 RNU4-30P-201ENST00000410245 143 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 RNU2-54P-201ENST00000410299 190 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 AC004965.1-201ENST00000413033 213 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.16□□□□□ -2.22
NANOGQ9H9S0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.16□□□□□ -2.22
NANOGQ9H9S0 AL135790.2-201ENST00000437701 267 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 Y_RNA.631-201ENST00000459607 101 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 AC091021.1-201ENST00000468051 388 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 RPS26P55-201ENST00000471178 356 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 RNU7-172P-201ENST00000517125 64 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 AC091178.2-201ENST00000584401 117 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 RAC1P9-201ENST00000604990 392 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 AC022441.3-201ENST00000605737 136 ntBASIC1.16□□□□□ -2.22
NANOGQ9H9S0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
NANOGQ9H9S0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
NANOGQ9H9S0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.128-201ENST00000363391 112 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.471-201ENST00000384312 102 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 RNU6-102P-201ENST00000384485 104 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 RNU6-823P-201ENST00000391042 103 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 MIR873-201ENST00000401120 77 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 MIR548P-201ENST00000408336 84 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 RNA5SP511-201ENST00000410487 115 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 RNU2-7P-201ENST00000410794 178 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 RPL30P13-201ENST00000418873 348 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.15□□□□□ -2.23
NANOGQ9H9S0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 RNU6-397P-201ENST00000516226 104 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 RNU6-155P-201ENST00000516347 100 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 AC024995.1-201ENST00000523014 93 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 AC021506.2-201ENST00000612354 169 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
NANOGQ9H9S0 MIR8054-201ENST00000620877 86 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 AC022140.2-201ENST00000623500 188 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 AC134503.1-201ENST00000633048 54 ntBASIC1.15□□□□□ -2.23
NANOGQ9H9S0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NANOGQ9H9S0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.15□□□□□ -2.23
NANOGQ9H9S0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
NANOGQ9H9S0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.15□□□□□ -2.23
NANOGQ9H9S0 AC100821.1-201ENST00000523153 2479 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.14□□□□□ -2.23
NANOGQ9H9S0 MIR302D-201ENST00000362275 68 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 RNU6-806P-201ENST00000365147 105 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.329-201ENST00000365209 107 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 SNORD14.1-201ENST00000365609 90 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 RNU6-505P-201ENST00000384427 107 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.527-201ENST00000384573 102 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 RNU6-440P-201ENST00000390882 105 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 MRPL42P3-201ENST00000401492 326 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 RNU6-121P-201ENST00000410525 99 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 MTCO3P19-201ENST00000415864 321 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 AC245047.3-201ENST00000429428 127 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 snoU13.27-201ENST00000459278 104 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 RNU6-1337P-201ENST00000516525 95 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 RNU6-1291P-201ENST00000516591 104 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 MIR3145-201ENST00000580727 82 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 AL121655.1-201ENST00000605811 308 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 MIR6078-201ENST00000611069 100 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 AL353770.2-201ENST00000620024 78 ntBASIC1.14□□□□□ -2.23
NANOGQ9H9S0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
NANOGQ9H9S0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.13□□□□□ -2.23
NANOGQ9H9S0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.13□□□□□ -2.23
NANOGQ9H9S0 AC018630.2-201ENST00000534866 2403 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 RNU6-271P-201ENST00000363858 105 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 SNORA72.2-201ENST00000365028 127 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 RNU6-1310P-201ENST00000384153 107 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 RNU6-360P-201ENST00000390944 104 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 RNU2-61P-201ENST00000411069 191 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.13□□□□□ -2.23
NANOGQ9H9S0 JTBP1-201ENST00000441314 247 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 U8.20-201ENST00000459445 131 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 AC093852.1-201ENST00000503587 266 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 TRMT112P2-201ENST00000512910 132 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 SNORA25.10-201ENST00000515926 124 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 RNU6-475P-201ENST00000516073 104 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 MIR4680-201ENST00000580906 66 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 DEFB117-201ENST00000602356 141 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 AC124312.5-201ENST00000604451 268 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 AP001485.1-201ENST00000604799 199 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 AL359821.1-201ENST00000605519 182 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 MIR8074-201ENST00000615081 81 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 AC006435.5-201ENST00000624486 112 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 MIR6079-201ENST00000635807 62 ntBASIC1.13□□□□□ -2.23
NANOGQ9H9S0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.12□□□□□ -2.23
NANOGQ9H9S0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
NANOGQ9H9S0 MIR26B-201ENST00000362251 77 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 SNORA1B-201ENST00000362535 133 ntBASIC1.12□□□□□ -2.23
NANOGQ9H9S0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 210.6 ms