Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 SNORA71.1-201ENST00000364523 117 ntBASIC2.77□□□□□ -1.97
YIPF4Q9BSR8 RNU1-52P-201ENST00000384190 164 ntBASIC2.77□□□□□ -1.97
YIPF4Q9BSR8 SNORA72-201ENST00000384339 132 ntBASIC2.77□□□□□ -1.97
YIPF4Q9BSR8 SNORD37.2-201ENST00000391075 66 ntBASIC2.77□□□□□ -1.97
YIPF4Q9BSR8 AL512604.1-201ENST00000404812 257 ntBASIC2.77□□□□□ -1.97
YIPF4Q9BSR8 MIR1262-201ENST00000408276 93 ntBASIC2.77□□□□□ -1.97
YIPF4Q9BSR8 AC007064.1-201ENST00000412238 351 ntBASIC2.77□□□□□ -1.97
YIPF4Q9BSR8 AP004217.1-201ENST00000480579 346 ntBASIC2.77□□□□□ -1.97
YIPF4Q9BSR8 AL049861.1-201ENST00000603130 150 ntBASIC2.77□□□□□ -1.97
YIPF4Q9BSR8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.77□□□□□ -1.97
YIPF4Q9BSR8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
YIPF4Q9BSR8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
YIPF4Q9BSR8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
YIPF4Q9BSR8 SNORA80A-201ENST00000363922 136 ntBASIC2.76□□□□□ -1.97
YIPF4Q9BSR8 RNU6-160P-201ENST00000384591 107 ntBASIC2.76□□□□□ -1.97
YIPF4Q9BSR8 RNU1-131P-201ENST00000458943 161 ntBASIC2.76□□□□□ -1.97
YIPF4Q9BSR8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.76□□□□□ -1.97
YIPF4Q9BSR8 RNU7-128P-201ENST00000517247 62 ntBASIC2.76□□□□□ -1.97
YIPF4Q9BSR8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.76□□□□□ -1.97
YIPF4Q9BSR8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
YIPF4Q9BSR8 RNU6-978P-201ENST00000364371 103 ntBASIC2.75□□□□□ -1.97
YIPF4Q9BSR8 SNORA44-201ENST00000384584 132 ntBASIC2.75□□□□□ -1.97
YIPF4Q9BSR8 RPS27P1-201ENST00000450552 247 ntBASIC2.75□□□□□ -1.97
YIPF4Q9BSR8 SNORD11-201ENST00000459124 84 ntBASIC2.75□□□□□ -1.97
YIPF4Q9BSR8 RNU7-172P-201ENST00000517125 64 ntBASIC2.75□□□□□ -1.97
YIPF4Q9BSR8 MIR3646-201ENST00000578301 84 ntBASIC2.75□□□□□ -1.97
YIPF4Q9BSR8 MIR6844-201ENST00000637122 62 ntBASIC2.75□□□□□ -1.97
YIPF4Q9BSR8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
YIPF4Q9BSR8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.75□□□□□ -1.97
YIPF4Q9BSR8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
YIPF4Q9BSR8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 Y_RNA.127-201ENST00000363386 109 ntBASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 RNU4-13P-201ENST00000364019 141 ntBASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 Y_RNA.796-201ENST00000364268 102 ntBASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 RNA5SP205-201ENST00000364653 136 ntBASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 Y_RNA.799-201ENST00000364992 102 ntBASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 Y_RNA.521-201ENST00000384560 114 ntBASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 RNA5SP496-201ENST00000391240 109 ntBASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 HMGN2P34-201ENST00000437647 269 ntBASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 AC008267.6-201ENST00000441664 139 ntBASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 RPL39P40-201ENST00000445481 146 ntBASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 RNU6-1211P-201ENST00000459179 105 ntBASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 RNU6-1333P-201ENST00000516162 93 ntBASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 U6.73-201ENST00000619194 103 ntBASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
YIPF4Q9BSR8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 Y_RNA.91-201ENST00000363042 107 ntBASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 Y_RNA.203-201ENST00000364106 102 ntBASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 SNORD116-14-201ENST00000383894 92 ntBASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 SNORD116-17-201ENST00000383929 92 ntBASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 SNORD116-15-201ENST00000384445 92 ntBASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 SNORD116-19-201ENST00000384729 92 ntBASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 SUMO1P4-201ENST00000429430 302 ntBASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 AC107083.1-201ENST00000439643 279 ntBASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 RNA5SP76-201ENST00000516277 87 ntBASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 RNU6-197P-201ENST00000516680 100 ntBASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 RNU1-104P-201ENST00000517280 175 ntBASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 RPL23AP91-201ENST00000569211 455 ntBASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 SNORD14A-201ENST00000606526 91 ntBASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
YIPF4Q9BSR8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 SNORA33-201ENST00000363664 130 ntBASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 RNU1-96P-201ENST00000364163 162 ntBASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 RNU6-597P-201ENST00000365620 102 ntBASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 Y_RNA.525-201ENST00000384570 113 ntBASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 SNORA75.5-201ENST00000391291 81 ntBASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 SNORD88.1-201ENST00000408684 91 ntBASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 RNA5SP270-201ENST00000411361 118 ntBASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 SCGB1D5P-201ENST00000515134 247 ntBASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 AC011604.1-201ENST00000545978 196 ntBASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 MIR378D2-201ENST00000580636 98 ntBASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 MIR6733-201ENST00000635723 61 ntBASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.72□□□□□ -1.97
YIPF4Q9BSR8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
YIPF4Q9BSR8 RNU6-1209P-201ENST00000363655 107 ntBASIC2.71□□□□□ -1.98
YIPF4Q9BSR8 SNORD114-6-201ENST00000364393 72 ntBASIC2.71□□□□□ -1.98
YIPF4Q9BSR8 SNORD50B-201ENST00000364995 70 ntBASIC2.71□□□□□ -1.98
YIPF4Q9BSR8 MIR562-201ENST00000384894 95 ntBASIC2.71□□□□□ -1.98
YIPF4Q9BSR8 AC011406.1-201ENST00000512440 370 ntBASIC2.71□□□□□ -1.98
YIPF4Q9BSR8 SNORD77.4-201ENST00000516158 81 ntBASIC2.71□□□□□ -1.98
YIPF4Q9BSR8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.71□□□□□ -1.98
YIPF4Q9BSR8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.71□□□□□ -1.98
YIPF4Q9BSR8 AC022202.1-201ENST00000613515 211 ntBASIC2.71□□□□□ -1.98
YIPF4Q9BSR8 AP001340.1-201ENST00000624405 217 ntBASIC2.71□□□□□ -1.98
YIPF4Q9BSR8 U6.108-201ENST00000637764 58 ntBASIC2.71□□□□□ -1.98
YIPF4Q9BSR8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
YIPF4Q9BSR8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 213.1 ms