Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 Y_RNA.124-201ENST00000363339 93 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-713P-201ENST00000384761 107 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-1203P-201ENST00000410703 110 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 EBAG9P1-201ENST00000418955 543 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 AL445685.2-201ENST00000422551 342 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 AC010154.1-201ENST00000425857 269 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 RPS26P55-201ENST00000471178 356 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 AC097462.1-201ENST00000514125 324 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-436P-201ENST00000516171 114 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 SUB1P4-201ENST00000566062 339 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 MIR6845-201ENST00000613182 61 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 AC010615.1-201ENST00000594254 1764 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-414P-201ENST00000363705 104 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 Y_RNA.193-201ENST00000363979 102 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 Y_RNA.329-201ENST00000365209 107 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 RNA5SP37-201ENST00000365420 130 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 Y_RNA.461-201ENST00000384263 103 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 MIR1302-6-201ENST00000408466 90 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 AL139156.1-201ENST00000412785 841 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 AC069257.2-201ENST00000441819 155 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 AC010409.1-201ENST00000487382 476 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 RNU7-99P-201ENST00000516271 62 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 SNORA31.17-201ENST00000516953 127 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 RNU7-172P-201ENST00000517125 64 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 AC084364.2-201ENST00000546924 395 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 AC110588.1-201ENST00000559699 137 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 U4.1-201ENST00000620349 87 ntBASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
KRTCAP3Q53RY4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 RNU4-90P-201ENST00000362773 141 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 RNU1-22P-201ENST00000363334 158 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 Y_RNA.383-201ENST00000383855 97 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-505P-201ENST00000384427 107 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 MIR1302-3-201ENST00000408128 138 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 RNU2-61P-201ENST00000411069 191 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 AC245047.4-201ENST00000433189 144 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 POLR2KP2-201ENST00000438155 177 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 TRBVB-201ENST00000477100 408 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-1278P-201ENST00000516130 107 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 MIR3149-201ENST00000584629 83 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 MIR5002-201ENST00000584713 97 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 AP001282.2-201ENST00000616149 309 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 U6.108-201ENST00000637764 58 ntBASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRTCAP3Q53RY4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-112P-201ENST00000363599 104 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 Y_RNA.452-201ENST00000384202 108 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 MIR520A-201ENST00000384862 85 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 RNU11-5P-201ENST00000391216 129 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-710P-201ENST00000410424 105 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 RNA5SP338-201ENST00000410495 85 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 AC024067.1-201ENST00000426199 223 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 HSPE1P13-201ENST00000451143 297 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 snoU13.9-201ENST00000458927 103 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-717P-201ENST00000459076 104 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 AL163195.1-201ENST00000496941 348 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 AC107393.1-201ENST00000512403 346 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 RNU7-128P-201ENST00000517247 62 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 MIR3145-201ENST00000580727 82 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 DEFB117-201ENST00000602356 141 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 AC127459.3-201ENST00000624328 466 ntBASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTCAP3Q53RY4 Y_RNA.237-201ENST00000364439 102 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-290P-201ENST00000365212 101 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 Y_RNA.418-201ENST00000384029 102 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 Y_RNA.569-201ENST00000384749 103 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 MIR1267-201ENST00000408723 78 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 FTH1P12-201ENST00000432137 551 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 RPS26P45-201ENST00000471748 340 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 RPL36AP21-201ENST00000490372 323 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 Y_RNA.668-201ENST00000516233 93 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-970P-201ENST00000516312 107 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 RNU6-1338P-201ENST00000516328 91 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 DEFB108E-201ENST00000524692 240 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 RPL21P9-201ENST00000556149 474 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 MIR5089-201ENST00000580047 84 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 AC073413.2-201ENST00000604332 360 ntBASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.74□□□□□ -2.13
KRTCAP3Q53RY4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms