Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RNU7-141P-201ENST00000459304 62 ntBASIC2.25□□□□□ -2.05
NKX6-1P78426 AC117454.1-201ENST00000491120 168 ntBASIC2.25□□□□□ -2.05
NKX6-1P78426 AC084364.2-201ENST00000546924 395 ntBASIC2.25□□□□□ -2.05
NKX6-1P78426 AP003357.1-201ENST00000604497 148 ntBASIC2.25□□□□□ -2.05
NKX6-1P78426 AC012640.5-201ENST00000623897 319 ntBASIC2.25□□□□□ -2.05
NKX6-1P78426 U6.108-201ENST00000637764 58 ntBASIC2.25□□□□□ -2.05
NKX6-1P78426 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NKX6-1P78426 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.25□□□□□ -2.05
NKX6-1P78426 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.25□□□□□ -2.05
NKX6-1P78426 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NKX6-1P78426 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
NKX6-1P78426 RNU6-1205P-201ENST00000363625 106 ntBASIC2.24□□□□□ -2.05
NKX6-1P78426 Y_RNA.292-201ENST00000364904 97 ntBASIC2.24□□□□□ -2.05
NKX6-1P78426 U8.7-201ENST00000364940 136 ntBASIC2.24□□□□□ -2.05
NKX6-1P78426 RNU6-144P-201ENST00000383951 107 ntBASIC2.24□□□□□ -2.05
NKX6-1P78426 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.24□□□□□ -2.05
NKX6-1P78426 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.24□□□□□ -2.05
NKX6-1P78426 RNU4-53P-201ENST00000410828 140 ntBASIC2.24□□□□□ -2.05
NKX6-1P78426 RNU6-651P-201ENST00000411040 105 ntBASIC2.24□□□□□ -2.05
NKX6-1P78426 SNORD2.1-201ENST00000458762 69 ntBASIC2.24□□□□□ -2.05
NKX6-1P78426 AC055731.1-201ENST00000474387 401 ntBASIC2.24□□□□□ -2.05
NKX6-1P78426 RNVU1-2-201ENST00000516326 135 ntBASIC2.24□□□□□ -2.05
NKX6-1P78426 SNORA31.11-201ENST00000516528 139 ntBASIC2.24□□□□□ -2.05
NKX6-1P78426 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.24□□□□□ -2.05
NKX6-1P78426 AC078938.1-201ENST00000620993 318 ntBASIC2.24□□□□□ -2.05
NKX6-1P78426 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.24□□□□□ -2.05
NKX6-1P78426 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
NKX6-1P78426 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
NKX6-1P78426 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NKX6-1P78426 Y_RNA.76-201ENST00000362931 109 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 Y_RNA.257-201ENST00000364596 102 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 Y_RNA.293-201ENST00000364908 93 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 SNORA72-201ENST00000384339 132 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 AL355497.1-201ENST00000406262 551 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 RNU2-7P-201ENST00000410794 178 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 RNU2-14P-201ENST00000411053 191 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NKX6-1P78426 AC091021.1-201ENST00000468051 388 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 RPL23AP54-201ENST00000495129 419 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.23□□□□□ -2.05
NKX6-1P78426 RNU6-341P-201ENST00000516973 96 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 RNU6-1096P-201ENST00000517089 102 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 RNA5SP402-201ENST00000517148 110 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 AC024405.2-202ENST00000532731 184 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 AC090425.1-201ENST00000610007 140 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 AL008718.3-201ENST00000610217 321 ntBASIC2.23□□□□□ -2.05
NKX6-1P78426 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.23□□□□□ -2.05
NKX6-1P78426 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
NKX6-1P78426 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NKX6-1P78426 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
NKX6-1P78426 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
NKX6-1P78426 RNY1-201ENST00000364228 113 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 Y_RNA.267-201ENST00000364679 109 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 RNU6-1318P-201ENST00000365389 103 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 MIR144-201ENST00000384886 86 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 SNORA36B-201ENST00000410438 131 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 RPS4XP11-201ENST00000446897 772 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.22□□□□□ -2.05
NKX6-1P78426 AC233266.1-201ENST00000454518 96 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 snoU13.23-201ENST00000458863 104 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 COX6CP14-201ENST00000469580 174 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.22□□□□□ -2.05
NKX6-1P78426 IGKV3-31-201ENST00000523109 329 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 AC011604.1-201ENST00000545978 196 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 MIR4648-201ENST00000580107 72 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 AC091178.2-201ENST00000584401 117 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 AC242852.1-201ENST00000612151 96 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 U4.3-201ENST00000621047 82 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 AC244015.1-201ENST00000622301 99 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.22□□□□□ -2.05
NKX6-1P78426 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
NKX6-1P78426 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NKX6-1P78426 MIR520A-201ENST00000384862 85 ntBASIC2.21□□□□□ -2.06
NKX6-1P78426 Y_RNA.621-201ENST00000411065 96 ntBASIC2.21□□□□□ -2.06
NKX6-1P78426 RNU6-794P-201ENST00000517261 64 ntBASIC2.21□□□□□ -2.06
NKX6-1P78426 AC127455.1-201ENST00000565496 145 ntBASIC2.21□□□□□ -2.06
NKX6-1P78426 SUB1P4-201ENST00000566062 339 ntBASIC2.21□□□□□ -2.06
NKX6-1P78426 DEFB122-202ENST00000569013 197 ntBASIC2.21□□□□□ -2.06
NKX6-1P78426 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.21□□□□□ -2.06
NKX6-1P78426 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
NKX6-1P78426 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NKX6-1P78426 RNA5SP289-201ENST00000362332 137 ntBASIC2.2□□□□□ -2.06
NKX6-1P78426 Y_RNA.199-201ENST00000364014 102 ntBASIC2.2□□□□□ -2.06
NKX6-1P78426 Y_RNA.200-201ENST00000364018 102 ntBASIC2.2□□□□□ -2.06
NKX6-1P78426 Y_RNA.262-201ENST00000364641 102 ntBASIC2.2□□□□□ -2.06
NKX6-1P78426 RNU6-950P-201ENST00000384651 107 ntBASIC2.2□□□□□ -2.06
NKX6-1P78426 MIR27B-201ENST00000385129 97 ntBASIC2.2□□□□□ -2.06
NKX6-1P78426 MIR1298-201ENST00000408783 112 ntBASIC2.2□□□□□ -2.06
NKX6-1P78426 AC245047.4-201ENST00000433189 144 ntBASIC2.2□□□□□ -2.06
NKX6-1P78426 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.2□□□□□ -2.06
NKX6-1P78426 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.2□□□□□ -2.06
NKX6-1P78426 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.2□□□□□ -2.06
NKX6-1P78426 AL358944.1-201ENST00000528537 144 ntBASIC2.2□□□□□ -2.06
NKX6-1P78426 AC009779.6-201ENST00000603972 165 ntBASIC2.2□□□□□ -2.06
NKX6-1P78426 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
NKX6-1P78426 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
NKX6-1P78426 AC007336.1-201ENST00000576365 3828 ntBASIC2.2□□□□□ -2.06
NKX6-1P78426 AC008555.8-201ENST00000623602 2168 ntBASIC2.19□□□□□ -2.06
NKX6-1P78426 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
NKX6-1P78426 SNORD114-30-201ENST00000364448 72 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms