Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.26□□□□□ -2.21
PTPN4P29074 AL050343.2-201ENST00000607338 280 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 AC011476.5-201ENST00000615594 130 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 MIR8065-201ENST00000620577 100 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 MIR8054-201ENST00000620877 86 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 AL513423.1-201ENST00000621695 132 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 AL008636.1-201ENST00000625038 1018 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 U6.92-201ENST00000636464 89 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PTPN4P29074 AC018630.2-201ENST00000534866 2403 ntBASIC1.26□□□□□ -2.21
PTPN4P29074 Y_RNA.124-201ENST00000363339 93 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 Y_RNA.269-201ENST00000364685 89 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 RNU1-115P-201ENST00000365329 160 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 Y_RNA.361-201ENST00000365515 120 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 MIR873-201ENST00000401120 77 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.25□□□□□ -2.21
PTPN4P29074 RNU4-77P-201ENST00000516692 156 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 MIR4659A-201ENST00000580269 81 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 AL390123.1-201ENST00000603216 237 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 AC092447.9-201ENST00000603395 144 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 AL133255.1-201ENST00000606374 441 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 AC004467.1-201ENST00000615678 330 ntBASIC1.25□□□□□ -2.21
PTPN4P29074 Y_RNA.116-201ENST00000363292 103 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 SNORD115-30-201ENST00000364117 82 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 RNU6-53P-201ENST00000365367 106 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 RNA5SP259-201ENST00000365541 109 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 MIR618-201ENST00000385287 98 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 SNORA12.1-201ENST00000390873 148 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 RNU6-440P-201ENST00000390882 105 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.24□□□□□ -2.21
PTPN4P29074 AL137792.2-201ENST00000443484 235 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 Y_RNA.661-201ENST00000516003 99 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 RNU7-28P-201ENST00000516759 62 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 RNA5SP102-201ENST00000516865 106 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 AC021506.2-201ENST00000612354 169 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 MIR6079-201ENST00000635807 62 ntBASIC1.24□□□□□ -2.21
PTPN4P29074 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
PTPN4P29074 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.23□□□□□ -2.21
PTPN4P29074 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
PTPN4P29074 SNORD114-7-201ENST00000362520 77 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 Y_RNA.101-201ENST00000363154 102 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 Y_RNA.197-201ENST00000364004 102 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 RNU6-20P-201ENST00000384106 107 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 Y_RNA.508-201ENST00000384502 114 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 Y_RNA.509-201ENST00000384506 99 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 AC022028.1-201ENST00000412054 408 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.23□□□□□ -2.21
PTPN4P29074 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.23□□□□□ -2.21
PTPN4P29074 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.23□□□□□ -2.21
PTPN4P29074 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 AC005176.2-201ENST00000596933 147 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 AC240442.1-201ENST00000616055 283 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 AC073349.3-201ENST00000617616 186 ntBASIC1.23□□□□□ -2.21
PTPN4P29074 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.23□□□□□ -2.21
PTPN4P29074 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.23□□□□□ -2.21
PTPN4P29074 Y_RNA.39-201ENST00000362620 98 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 RNU6-626P-201ENST00000363354 107 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 Y_RNA.224-201ENST00000364308 111 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 RNU5E-4P-201ENST00000364931 120 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 RNU6-117P-201ENST00000365415 107 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 Y_RNA.355-201ENST00000365462 98 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.22□□□□□ -2.21
PTPN4P29074 MIR518E-201ENST00000385252 88 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 RNU2-54P-201ENST00000410299 190 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 RNU6-1199P-201ENST00000411249 104 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 AC091021.1-201ENST00000468051 388 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 AC004223.1-201ENST00000479840 271 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 MIR5188-201ENST00000583467 113 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 AC091178.2-201ENST00000584401 117 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 C8orf59P2-201ENST00000603441 271 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 AL080274.1-201ENST00000605565 220 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 SNORD58B-201ENST00000607313 66 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 AL138825.1-201ENST00000618587 192 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 AL606534.2-204ENST00000635008 178 ntBASIC1.22□□□□□ -2.21
PTPN4P29074 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PTPN4P29074 Y_RNA.112-201ENST00000363250 102 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 Y_RNA.230-201ENST00000364348 109 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 RNU6-867P-201ENST00000364956 107 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 Y_RNA.419-201ENST00000384041 102 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 RNY1P14-201ENST00000384426 108 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 RPL39P38-201ENST00000467018 153 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 RNU6-1278P-201ENST00000516130 107 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 RNU7-40P-201ENST00000516397 64 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 RNU6-966P-201ENST00000516479 104 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 SNORA40.14-201ENST00000516543 86 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 AC010205.1-201ENST00000616668 449 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 uc_338.22-201ENST00000622722 187 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 AC127459.3-201ENST00000624328 466 ntBASIC1.21□□□□□ -2.22
PTPN4P29074 Y_RNA.80-201ENST00000362996 102 ntBASIC1.2□□□□□ -2.22
PTPN4P29074 Y_RNA.191-201ENST00000363972 113 ntBASIC1.2□□□□□ -2.22
PTPN4P29074 Y_RNA.395-201ENST00000383945 109 ntBASIC1.2□□□□□ -2.22
PTPN4P29074 Y_RNA.485-201ENST00000384395 102 ntBASIC1.2□□□□□ -2.22
PTPN4P29074 RNU6-376P-201ENST00000384731 106 ntBASIC1.2□□□□□ -2.22
PTPN4P29074 AL031003.1-201ENST00000404229 172 ntBASIC1.2□□□□□ -2.22
PTPN4P29074 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.2□□□□□ -2.22
PTPN4P29074 AL160004.2-201ENST00000432935 350 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 274.1 ms