Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 RNU7-28P-201ENST00000516759 62 ntBASIC3.99□□□□□ -1.77
COL9A1P20849 SCARNA14-201ENST00000516903 136 ntBASIC3.99□□□□□ -1.77
COL9A1P20849 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.99□□□□□ -1.77
COL9A1P20849 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.99□□□□□ -1.77
COL9A1P20849 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.99□□□□□ -1.77
COL9A1P20849 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.99□□□□□ -1.77
COL9A1P20849 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL9A1P20849 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL9A1P20849 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL9A1P20849 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
COL9A1P20849 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL9A1P20849 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL9A1P20849 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.98□□□□□ -1.77
COL9A1P20849 Y_RNA.94-201ENST00000363068 106 ntBASIC3.98□□□□□ -1.77
COL9A1P20849 Y_RNA.191-201ENST00000363972 113 ntBASIC3.98□□□□□ -1.77
COL9A1P20849 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.98□□□□□ -1.77
COL9A1P20849 IGLV3-26-201ENST00000520756 302 ntBASIC3.98□□□□□ -1.77
COL9A1P20849 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.98□□□□□ -1.77
COL9A1P20849 MIR7112-201ENST00000616126 65 ntBASIC3.98□□□□□ -1.77
COL9A1P20849 MIR7702-201ENST00000621931 59 ntBASIC3.98□□□□□ -1.77
COL9A1P20849 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL9A1P20849 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.98□□□□□ -1.77
COL9A1P20849 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
COL9A1P20849 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
COL9A1P20849 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.98□□□□□ -1.77
COL9A1P20849 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL9A1P20849 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
COL9A1P20849 AC091564.4-201ENST00000533934 2194 ntBASIC3.97□□□□□ -1.77
COL9A1P20849 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL9A1P20849 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL9A1P20849 MIR504-201ENST00000385065 83 ntBASIC3.97□□□□□ -1.77
COL9A1P20849 MIR95-201ENST00000385072 81 ntBASIC3.97□□□□□ -1.77
COL9A1P20849 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.97□□□□□ -1.77
COL9A1P20849 RNU6-1077P-201ENST00000410506 102 ntBASIC3.97□□□□□ -1.77
COL9A1P20849 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.97□□□□□ -1.77
COL9A1P20849 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.97□□□□□ -1.77
COL9A1P20849 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.97□□□□□ -1.77
COL9A1P20849 MIR4435-1-201ENST00000582552 80 ntBASIC3.97□□□□□ -1.77
COL9A1P20849 MIR5187-201ENST00000583479 76 ntBASIC3.97□□□□□ -1.77
COL9A1P20849 AL033523.1-201ENST00000605153 153 ntBASIC3.97□□□□□ -1.77
COL9A1P20849 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.97□□□□□ -1.77
COL9A1P20849 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
COL9A1P20849 AC092881.1-201ENST00000638218 2733 ntBASIC3.97□□□□□ -1.77
COL9A1P20849 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL9A1P20849 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
COL9A1P20849 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL9A1P20849 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL9A1P20849 AC092435.4-201ENST00000623012 4159 ntBASIC3.96□□□□□ -1.78
COL9A1P20849 AC009414.1-201ENST00000427200 443 ntBASIC3.96□□□□□ -1.78
COL9A1P20849 AC108729.3-201ENST00000513484 108 ntBASIC3.96□□□□□ -1.78
COL9A1P20849 SNORA31.4-201ENST00000516049 129 ntBASIC3.96□□□□□ -1.78
COL9A1P20849 RNA5SP341-201ENST00000516261 117 ntBASIC3.96□□□□□ -1.78
COL9A1P20849 RPPH1-2P-201ENST00000516688 293 ntBASIC3.96□□□□□ -1.78
COL9A1P20849 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.96□□□□□ -1.78
COL9A1P20849 MIR3152-201ENST00000579801 74 ntBASIC3.96□□□□□ -1.78
COL9A1P20849 ELOCP29-201ENST00000588193 334 ntBASIC3.96□□□□□ -1.78
COL9A1P20849 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL9A1P20849 AL353746.1-201ENST00000566293 6881 ntBASIC3.96□□□□□ -1.78
COL9A1P20849 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL9A1P20849 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.95□□□□□ -1.78
COL9A1P20849 AC017071.1-201ENST00000564407 2204 ntBASIC3.95□□□□□ -1.78
COL9A1P20849 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL9A1P20849 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL9A1P20849 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL9A1P20849 AC093908.1-201ENST00000623125 8092 ntBASIC3.95□□□□□ -1.78
COL9A1P20849 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL9A1P20849 RNU6-1319P-201ENST00000390855 104 ntBASIC3.95□□□□□ -1.78
COL9A1P20849 RNU6-747P-201ENST00000390928 104 ntBASIC3.95□□□□□ -1.78
COL9A1P20849 RNU6-241P-201ENST00000391148 104 ntBASIC3.95□□□□□ -1.78
COL9A1P20849 RNU6-177P-201ENST00000411257 104 ntBASIC3.95□□□□□ -1.78
COL9A1P20849 ATP5A1P2-201ENST00000412323 255 ntBASIC3.95□□□□□ -1.78
COL9A1P20849 CKS1BP2-201ENST00000497342 240 ntBASIC3.95□□□□□ -1.78
COL9A1P20849 RN7SL636P-201ENST00000497504 294 ntBASIC3.95□□□□□ -1.78
COL9A1P20849 AC069240.1-201ENST00000548774 375 ntBASIC3.95□□□□□ -1.78
COL9A1P20849 MIR4425-201ENST00000580572 84 ntBASIC3.95□□□□□ -1.78
COL9A1P20849 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL9A1P20849 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL9A1P20849 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.95□□□□□ -1.78
COL9A1P20849 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL9A1P20849 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
COL9A1P20849 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.94□□□□□ -1.78
COL9A1P20849 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.94□□□□□ -1.78
COL9A1P20849 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL9A1P20849 AP000567.1-201ENST00000406413 156 ntBASIC3.94□□□□□ -1.78
COL9A1P20849 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.94□□□□□ -1.78
COL9A1P20849 AL135938.1-201ENST00000443141 297 ntBASIC3.94□□□□□ -1.78
COL9A1P20849 TRBV12-1-201ENST00000479785 344 ntBASIC3.94□□□□□ -1.78
COL9A1P20849 RN7SL504P-201ENST00000494496 287 ntBASIC3.94□□□□□ -1.78
COL9A1P20849 SNORA48.11-201ENST00000517015 89 ntBASIC3.94□□□□□ -1.78
COL9A1P20849 AC090821.2-201ENST00000523552 176 ntBASIC3.94□□□□□ -1.78
COL9A1P20849 AC012531.5-201ENST00000611375 151 ntBASIC3.94□□□□□ -1.78
COL9A1P20849 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL9A1P20849 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
COL9A1P20849 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.94□□□□□ -1.78
COL9A1P20849 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL9A1P20849 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.93□□□□□ -1.78
COL9A1P20849 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL9A1P20849 Y_RNA.171-201ENST00000363760 102 ntBASIC3.93□□□□□ -1.78
COL9A1P20849 RNU6-424P-201ENST00000384367 105 ntBASIC3.93□□□□□ -1.78
COL9A1P20849 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms