Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MIR873-201ENST00000401120 77 ntBASIC2.01□□□□□ -2.09
MMP3P08254 RNU2-61P-201ENST00000411069 191 ntBASIC2.01□□□□□ -2.09
MMP3P08254 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
MMP3P08254 AC099677.2-201ENST00000436385 175 ntBASIC2.01□□□□□ -2.09
MMP3P08254 RNA5SP20-201ENST00000515976 84 ntBASIC2.01□□□□□ -2.09
MMP3P08254 SUMO2P18-201ENST00000518873 252 ntBASIC2.01□□□□□ -2.09
MMP3P08254 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.01□□□□□ -2.09
MMP3P08254 AC078899.2-201ENST00000595282 212 ntBASIC2.01□□□□□ -2.09
MMP3P08254 MIR338-201ENST00000636369 67 ntBASIC2.01□□□□□ -2.09
MMP3P08254 Y_RNA.60-201ENST00000362831 98 ntBASIC2□□□□□ -2.09
MMP3P08254 SNORD27-201ENST00000363981 72 ntBASIC2□□□□□ -2.09
MMP3P08254 Y_RNA.447-201ENST00000384184 113 ntBASIC2□□□□□ -2.09
MMP3P08254 RNU6-514P-201ENST00000384208 107 ntBASIC2□□□□□ -2.09
MMP3P08254 RNU4-52P-201ENST00000384209 138 ntBASIC2□□□□□ -2.09
MMP3P08254 SNORD116-13-201ENST00000384408 92 ntBASIC2□□□□□ -2.09
MMP3P08254 RNU6-136P-201ENST00000384663 107 ntBASIC2□□□□□ -2.09
MMP3P08254 MIR29C-201ENST00000385231 88 ntBASIC2□□□□□ -2.09
MMP3P08254 AL117342.1-201ENST00000404861 406 ntBASIC2□□□□□ -2.09
MMP3P08254 RNU6-855P-201ENST00000410395 104 ntBASIC2□□□□□ -2.09
MMP3P08254 RNU6-1186P-201ENST00000410429 97 ntBASIC2□□□□□ -2.09
MMP3P08254 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2□□□□□ -2.09
MMP3P08254 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2□□□□□ -2.09
MMP3P08254 RPS26P55-201ENST00000471178 356 ntBASIC2□□□□□ -2.09
MMP3P08254 RNU6-191P-201ENST00000516295 94 ntBASIC2□□□□□ -2.09
MMP3P08254 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2□□□□□ -2.09
MMP3P08254 MIR3128-201ENST00000581957 66 ntBASIC2□□□□□ -2.09
MMP3P08254 AC037487.3-201ENST00000606668 112 ntBASIC2□□□□□ -2.09
MMP3P08254 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2□□□□□ -2.09
MMP3P08254 AC009487.4-201ENST00000624969 3585 ntBASIC2□□□□□ -2.09
MMP3P08254 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
MMP3P08254 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2□□□□□ -2.09
MMP3P08254 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
MMP3P08254 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MMP3P08254 Y_RNA.117-201ENST00000363294 101 ntBASIC1.99□□□□□ -2.09
MMP3P08254 Y_RNA.136-201ENST00000363444 102 ntBASIC1.99□□□□□ -2.09
MMP3P08254 RNU6-1048P-201ENST00000364054 107 ntBASIC1.99□□□□□ -2.09
MMP3P08254 Y_RNA.277-201ENST00000364754 102 ntBASIC1.99□□□□□ -2.09
MMP3P08254 Y_RNA.350-201ENST00000365409 98 ntBASIC1.99□□□□□ -2.09
MMP3P08254 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
MMP3P08254 RNU6-326P-201ENST00000365480 107 ntBASIC1.99□□□□□ -2.09
MMP3P08254 Y_RNA.518-201ENST00000384552 113 ntBASIC1.99□□□□□ -2.09
MMP3P08254 AL603910.2-201ENST00000407268 136 ntBASIC1.99□□□□□ -2.09
MMP3P08254 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.99□□□□□ -2.09
MMP3P08254 RNU6-651P-201ENST00000411040 105 ntBASIC1.99□□□□□ -2.09
MMP3P08254 BTF3P4-201ENST00000418852 495 ntBASIC1.99□□□□□ -2.09
MMP3P08254 AL353689.1-201ENST00000438895 199 ntBASIC1.99□□□□□ -2.09
MMP3P08254 RPL39P38-201ENST00000467018 153 ntBASIC1.99□□□□□ -2.09
MMP3P08254 RNU6-1337P-201ENST00000516525 95 ntBASIC1.99□□□□□ -2.09
MMP3P08254 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.99□□□□□ -2.09
MMP3P08254 MIR4255-201ENST00000579351 72 ntBASIC1.99□□□□□ -2.09
MMP3P08254 U2.14-201ENST00000615943 113 ntBASIC1.99□□□□□ -2.09
MMP3P08254 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
MMP3P08254 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
MMP3P08254 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
MMP3P08254 MIR337-201ENST00000362281 93 ntBASIC1.98□□□□□ -2.09
MMP3P08254 RNU6-661P-201ENST00000362409 107 ntBASIC1.98□□□□□ -2.09
MMP3P08254 RNU1-96P-201ENST00000364163 162 ntBASIC1.98□□□□□ -2.09
MMP3P08254 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.98□□□□□ -2.09
MMP3P08254 Y_RNA.401-201ENST00000383965 117 ntBASIC1.98□□□□□ -2.09
MMP3P08254 RNU6-321P-201ENST00000410912 106 ntBASIC1.98□□□□□ -2.09
MMP3P08254 MTND4LP30-201ENST00000454092 297 ntBASIC1.98□□□□□ -2.09
MMP3P08254 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
MMP3P08254 SNORA31.25-201ENST00000517242 134 ntBASIC1.98□□□□□ -2.09
MMP3P08254 MIR5094-201ENST00000578766 85 ntBASIC1.98□□□□□ -2.09
MMP3P08254 AL512605.2-201ENST00000592972 256 ntBASIC1.98□□□□□ -2.09
MMP3P08254 MIR7111-201ENST00000619751 72 ntBASIC1.98□□□□□ -2.09
MMP3P08254 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.97□□□□□ -2.09
MMP3P08254 MIR335-201ENST00000362173 94 ntBASIC1.97□□□□□ -2.09
MMP3P08254 RNU1-22P-201ENST00000363334 158 ntBASIC1.97□□□□□ -2.09
MMP3P08254 Y_RNA.562-201ENST00000384695 113 ntBASIC1.97□□□□□ -2.09
MMP3P08254 RNA5SP338-201ENST00000410495 85 ntBASIC1.97□□□□□ -2.09
MMP3P08254 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.97□□□□□ -2.09
MMP3P08254 AC097462.1-201ENST00000514125 324 ntBASIC1.97□□□□□ -2.09
MMP3P08254 RNVU1-2-201ENST00000516326 135 ntBASIC1.97□□□□□ -2.09
MMP3P08254 RNU6-1271P-201ENST00000517049 105 ntBASIC1.97□□□□□ -2.09
MMP3P08254 AL137100.2-201ENST00000555786 315 ntBASIC1.97□□□□□ -2.09
MMP3P08254 MIR3684-201ENST00000579779 74 ntBASIC1.97□□□□□ -2.09
MMP3P08254 AC073413.2-201ENST00000604332 360 ntBASIC1.97□□□□□ -2.09
MMP3P08254 AC134026.1-201ENST00000623249 2239 ntBASIC1.97□□□□□ -2.09
MMP3P08254 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
MMP3P08254 CENPCP1-201ENST00000533085 2578 ntBASIC1.96□□□□□ -2.1
MMP3P08254 Y_RNA.44-201ENST00000362676 108 ntBASIC1.96□□□□□ -2.1
MMP3P08254 RNU6-271P-201ENST00000363858 105 ntBASIC1.96□□□□□ -2.1
MMP3P08254 Y_RNA.188-201ENST00000363952 111 ntBASIC1.96□□□□□ -2.1
MMP3P08254 SNORA16.1-201ENST00000364597 132 ntBASIC1.96□□□□□ -2.1
MMP3P08254 SNORA16B-201ENST00000364674 135 ntBASIC1.96□□□□□ -2.1
MMP3P08254 RNU6-740P-201ENST00000364734 105 ntBASIC1.96□□□□□ -2.1
MMP3P08254 RNU2-14P-201ENST00000411053 191 ntBASIC1.96□□□□□ -2.1
MMP3P08254 RNA5SP450-201ENST00000411206 102 ntBASIC1.96□□□□□ -2.1
MMP3P08254 EBAG9P1-201ENST00000418955 543 ntBASIC1.96□□□□□ -2.1
MMP3P08254 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.96□□□□□ -2.1
MMP3P08254 SNORA70.12-201ENST00000516084 153 ntBASIC1.96□□□□□ -2.1
MMP3P08254 RNU6-1146P-201ENST00000516282 102 ntBASIC1.96□□□□□ -2.1
MMP3P08254 RNU7-172P-201ENST00000517125 64 ntBASIC1.96□□□□□ -2.1
MMP3P08254 RNU7-128P-201ENST00000517247 62 ntBASIC1.96□□□□□ -2.1
MMP3P08254 MIR4643-201ENST00000577473 78 ntBASIC1.96□□□□□ -2.1
MMP3P08254 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.96□□□□□ -2.1
MMP3P08254 AC006006.1-201ENST00000603082 144 ntBASIC1.96□□□□□ -2.1
MMP3P08254 AL353149.1-201ENST00000610667 244 ntBASIC1.96□□□□□ -2.1
MMP3P08254 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms