Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AC006600.1-201ENST00000572529 153 ntBASIC1.66□□□□□ -2.14
CD4P01730 MIR4452-201ENST00000583004 71 ntBASIC1.66□□□□□ -2.14
CD4P01730 AL021879.1-201ENST00000611756 288 ntBASIC1.66□□□□□ -2.14
CD4P01730 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.66□□□□□ -2.14
CD4P01730 RNU6-961P-201ENST00000363893 105 ntBASIC1.65□□□□□ -2.15
CD4P01730 Y_RNA.191-201ENST00000363972 113 ntBASIC1.65□□□□□ -2.15
CD4P01730 SNORD115-30-201ENST00000364117 82 ntBASIC1.65□□□□□ -2.15
CD4P01730 RNU5E-4P-201ENST00000364931 120 ntBASIC1.65□□□□□ -2.15
CD4P01730 RNA5SP482-201ENST00000391269 118 ntBASIC1.65□□□□□ -2.15
CD4P01730 AL390729.2-201ENST00000416137 156 ntBASIC1.65□□□□□ -2.15
CD4P01730 STAG3L5P-204ENST00000443759 179 ntBASIC1.65□□□□□ -2.15
CD4P01730 RNU1-98P-201ENST00000458992 160 ntBASIC1.65□□□□□ -2.15
CD4P01730 MIR4659A-201ENST00000580269 81 ntBASIC1.65□□□□□ -2.15
CD4P01730 AC091178.2-201ENST00000584401 117 ntBASIC1.65□□□□□ -2.15
CD4P01730 PRR13P7-201ENST00000605538 430 ntBASIC1.65□□□□□ -2.15
CD4P01730 AL133255.1-201ENST00000606374 441 ntBASIC1.65□□□□□ -2.15
CD4P01730 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.65□□□□□ -2.15
CD4P01730 AL157834.3-201ENST00000615543 103 ntBASIC1.65□□□□□ -2.15
CD4P01730 AL353770.2-201ENST00000620024 78 ntBASIC1.65□□□□□ -2.15
CD4P01730 MIR4272-201ENST00000635924 64 ntBASIC1.65□□□□□ -2.15
CD4P01730 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.64□□□□□ -2.15
CD4P01730 RNU6-867P-201ENST00000364956 107 ntBASIC1.64□□□□□ -2.15
CD4P01730 RNU6-117P-201ENST00000365415 107 ntBASIC1.64□□□□□ -2.15
CD4P01730 MIR660-201ENST00000385235 97 ntBASIC1.64□□□□□ -2.15
CD4P01730 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.64□□□□□ -2.15
CD4P01730 AC091021.1-201ENST00000468051 388 ntBASIC1.64□□□□□ -2.15
CD4P01730 Y_RNA.713-201ENST00000517013 96 ntBASIC1.64□□□□□ -2.15
CD4P01730 AC019176.1-201ENST00000518519 225 ntBASIC1.64□□□□□ -2.15
CD4P01730 AP001485.1-201ENST00000604799 199 ntBASIC1.64□□□□□ -2.15
CD4P01730 AC240442.1-201ENST00000616055 283 ntBASIC1.64□□□□□ -2.15
CD4P01730 SNORD3E-202ENST00000627253 216 ntBASIC1.64□□□□□ -2.15
CD4P01730 AP000648.3-201ENST00000623539 4507 ntBASIC1.64□□□□□ -2.15
CD4P01730 Y_RNA.5-201ENST00000362334 102 ntBASIC1.63□□□□□ -2.15
CD4P01730 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.63□□□□□ -2.15
CD4P01730 Y_RNA.431-201ENST00000384086 102 ntBASIC1.63□□□□□ -2.15
CD4P01730 Y_RNA.496-201ENST00000384444 101 ntBASIC1.63□□□□□ -2.15
CD4P01730 Y_RNA.579-201ENST00000390939 94 ntBASIC1.63□□□□□ -2.15
CD4P01730 RPS27P16-201ENST00000425758 201 ntBASIC1.63□□□□□ -2.15
CD4P01730 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
CD4P01730 CHEK2P4-201ENST00000450340 246 ntBASIC1.63□□□□□ -2.15
CD4P01730 SNORA40.14-201ENST00000516543 86 ntBASIC1.63□□□□□ -2.15
CD4P01730 RPS29P30-201ENST00000600975 111 ntBASIC1.63□□□□□ -2.15
CD4P01730 U6.92-201ENST00000636464 89 ntBASIC1.63□□□□□ -2.15
CD4P01730 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CD4P01730 RNU6-626P-201ENST00000363354 107 ntBASIC1.62□□□□□ -2.15
CD4P01730 Y_RNA.197-201ENST00000364004 102 ntBASIC1.62□□□□□ -2.15
CD4P01730 Y_RNA.267-201ENST00000364679 109 ntBASIC1.62□□□□□ -2.15
CD4P01730 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.62□□□□□ -2.15
CD4P01730 RNU6-20P-201ENST00000384106 107 ntBASIC1.62□□□□□ -2.15
CD4P01730 Y_RNA.509-201ENST00000384506 99 ntBASIC1.62□□□□□ -2.15
CD4P01730 RNU5A-5P-201ENST00000411054 116 ntBASIC1.62□□□□□ -2.15
CD4P01730 AC096644.2-201ENST00000429278 159 ntBASIC1.62□□□□□ -2.15
CD4P01730 RPL39P38-201ENST00000467018 153 ntBASIC1.62□□□□□ -2.15
CD4P01730 Y_RNA.661-201ENST00000516003 99 ntBASIC1.62□□□□□ -2.15
CD4P01730 AC092447.9-201ENST00000603395 144 ntBASIC1.62□□□□□ -2.15
CD4P01730 Y_RNA.772-201ENST00000606692 102 ntBASIC1.62□□□□□ -2.15
CD4P01730 AL078604.3-201ENST00000615580 211 ntBASIC1.62□□□□□ -2.15
CD4P01730 AC010205.1-201ENST00000616668 449 ntBASIC1.62□□□□□ -2.15
CD4P01730 AC104985.2-201ENST00000620598 500 ntBASIC1.62□□□□□ -2.15
CD4P01730 AL031003.1-201ENST00000404229 172 ntBASIC1.61□□□□□ -2.15
CD4P01730 MIR1304-201ENST00000408243 91 ntBASIC1.61□□□□□ -2.15
CD4P01730 U8.19-201ENST00000459095 133 ntBASIC1.61□□□□□ -2.15
CD4P01730 RNU6-1170P-201ENST00000515974 106 ntBASIC1.61□□□□□ -2.15
CD4P01730 RN7SKP295-201ENST00000517264 153 ntBASIC1.61□□□□□ -2.15
CD4P01730 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.61□□□□□ -2.15
CD4P01730 C8orf59P2-201ENST00000603441 271 ntBASIC1.61□□□□□ -2.15
CD4P01730 AL365434.2-201ENST00000607979 234 ntBASIC1.61□□□□□ -2.15
CD4P01730 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CD4P01730 Y_RNA.112-201ENST00000363250 102 ntBASIC1.6□□□□□ -2.15
CD4P01730 Y_RNA.124-201ENST00000363339 93 ntBASIC1.6□□□□□ -2.15
CD4P01730 RNU4-76P-201ENST00000364509 141 ntBASIC1.6□□□□□ -2.15
CD4P01730 RNU6-505P-201ENST00000384427 107 ntBASIC1.6□□□□□ -2.15
CD4P01730 Y_RNA.540-201ENST00000384638 111 ntBASIC1.6□□□□□ -2.15
CD4P01730 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.6□□□□□ -2.15
CD4P01730 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.6□□□□□ -2.15
CD4P01730 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
CD4P01730 RPS29P23-201ENST00000458635 123 ntBASIC1.6□□□□□ -2.15
CD4P01730 AC023790.1-201ENST00000482174 347 ntBASIC1.6□□□□□ -2.15
CD4P01730 RNU4-77P-201ENST00000516692 156 ntBASIC1.6□□□□□ -2.15
CD4P01730 RNU6-1096P-201ENST00000517089 102 ntBASIC1.6□□□□□ -2.15
CD4P01730 SUMO2P16-201ENST00000519475 264 ntBASIC1.6□□□□□ -2.15
CD4P01730 AC022616.4-201ENST00000522985 181 ntBASIC1.6□□□□□ -2.15
CD4P01730 AC136443.5-201ENST00000603741 370 ntBASIC1.6□□□□□ -2.15
CD4P01730 AL080274.1-201ENST00000605565 220 ntBASIC1.6□□□□□ -2.15
CD4P01730 AL121655.1-201ENST00000605811 308 ntBASIC1.6□□□□□ -2.15
CD4P01730 AL606534.2-204ENST00000635008 178 ntBASIC1.6□□□□□ -2.15
CD4P01730 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CD4P01730 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.59□□□□□ -2.15
CD4P01730 AL161722.3-201ENST00000605789 2983 ntBASIC1.59□□□□□ -2.15
CD4P01730 SNORA1B-201ENST00000362535 133 ntBASIC1.59□□□□□ -2.15
CD4P01730 SNORD114-22-201ENST00000365423 72 ntBASIC1.59□□□□□ -2.15
CD4P01730 Y_RNA.446-201ENST00000384178 104 ntBASIC1.59□□□□□ -2.15
CD4P01730 RNU6-708P-201ENST00000384217 107 ntBASIC1.59□□□□□ -2.15
CD4P01730 Y_RNA.462-201ENST00000384268 102 ntBASIC1.59□□□□□ -2.15
CD4P01730 RNU6-424P-201ENST00000384367 105 ntBASIC1.59□□□□□ -2.15
CD4P01730 RNU6-710P-201ENST00000410424 105 ntBASIC1.59□□□□□ -2.15
CD4P01730 AL160004.2-201ENST00000432935 350 ntBASIC1.59□□□□□ -2.15
CD4P01730 AL162725.1-201ENST00000435405 301 ntBASIC1.59□□□□□ -2.15
CD4P01730 AC093852.1-201ENST00000503587 266 ntBASIC1.59□□□□□ -2.15
CD4P01730 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 389 ms