Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RNA5SP511-201ENST00000410487 115 ntBASIC1.05□□□□□ -2.24
TRIM3O75382 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.05□□□□□ -2.24
TRIM3O75382 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.05□□□□□ -2.24
TRIM3O75382 HSPE1P13-201ENST00000451143 297 ntBASIC1.05□□□□□ -2.24
TRIM3O75382 AL049830.1-201ENST00000468034 425 ntBASIC1.05□□□□□ -2.24
TRIM3O75382 RNU7-12P-201ENST00000516030 62 ntBASIC1.05□□□□□ -2.24
TRIM3O75382 RNU6-277P-201ENST00000516272 106 ntBASIC1.05□□□□□ -2.24
TRIM3O75382 RNU6-1096P-201ENST00000517089 102 ntBASIC1.05□□□□□ -2.24
TRIM3O75382 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.05□□□□□ -2.24
TRIM3O75382 AC005730.3-201ENST00000583067 366 ntBASIC1.05□□□□□ -2.24
TRIM3O75382 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
TRIM3O75382 RNU6-199P-201ENST00000362954 107 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 SNORD115-30-201ENST00000364117 82 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 Y_RNA.259-201ENST00000364619 101 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 Y_RNA.387-201ENST00000383918 102 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 SNORD116-29-201ENST00000384516 83 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 RNU5A-5P-201ENST00000411054 116 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 FCF1P4-201ENST00000448326 183 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
TRIM3O75382 RNU7-28P-201ENST00000516759 62 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 RNU6-699P-201ENST00000517081 110 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 RNU2-12P-201ENST00000517216 168 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 RNU6-1116P-201ENST00000517269 99 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 AL513534.2-201ENST00000603836 250 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 AC133104.2-201ENST00000615272 193 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 AC084781.2-201ENST00000615568 161 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 MIR8070-201ENST00000616510 88 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 U2.1-201ENST00000618978 145 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 MIR1302-1-201ENST00000637932 143 ntBASIC1.04□□□□□ -2.24
TRIM3O75382 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
TRIM3O75382 RNU6-626P-201ENST00000363354 107 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 RNU4-41P-201ENST00000364426 143 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 RNU6-20P-201ENST00000384106 107 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 MIR562-201ENST00000384894 95 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 MIR520G-201ENST00000385064 90 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 MIR559-201ENST00000385188 96 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 AL354751.2-201ENST00000415471 210 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 SUMO1P2-201ENST00000452524 304 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 ELOCP24-201ENST00000456370 334 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 RNU6-947P-201ENST00000516264 106 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 RNU6-917P-201ENST00000516294 104 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 RNU6-1337P-201ENST00000516525 95 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 UBE2V2P2-201ENST00000587677 504 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 AL117336.2-201ENST00000602435 335 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 AC006380.1-201ENST00000603598 186 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 BX284668.6-201ENST00000606899 438 ntBASIC1.03□□□□□ -2.24
TRIM3O75382 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.03□□□□□ -2.24
TRIM3O75382 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.03□□□□□ -2.24
TRIM3O75382 SNORA72.1-201ENST00000363485 129 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 Y_RNA.384-201ENST00000383909 102 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 RNY3P4-201ENST00000384428 101 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 MIR628-201ENST00000385229 95 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 SNORD78.2-201ENST00000391076 69 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 RNY4P36-201ENST00000391116 96 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 RNA5SP482-201ENST00000391269 118 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 Y_RNA.621-201ENST00000411065 96 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 AC104332.1-201ENST00000440471 797 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 Z98949.2-201ENST00000440996 144 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 Y_RNA.718-201ENST00000517110 102 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.02□□□□□ -2.25
TRIM3O75382 MIR4659A-201ENST00000580269 81 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 AC005176.2-201ENST00000596933 147 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 AL132765.2-201ENST00000610812 351 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 GHRLOS.1-201ENST00000610995 70 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 AC138305.3-201ENST00000624988 240 ntBASIC1.02□□□□□ -2.25
TRIM3O75382 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TRIM3O75382 MIRLET7C-201ENST00000362160 84 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 RNU6-490P-201ENST00000362985 107 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 RNU6-324P-201ENST00000363957 106 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 Y_RNA.303-201ENST00000364998 94 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 RNU6-1080P-201ENST00000383982 107 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 SNORA25-201ENST00000384384 134 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 MIR653-201ENST00000385279 96 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 SNORD41-201ENST00000386967 70 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 AL031003.1-201ENST00000404229 172 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 CHEK2P4-201ENST00000450340 246 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 AC091951.2-201ENST00000500762 203 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 RNU6-966P-201ENST00000516479 104 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 RNU6-1012P-201ENST00000516606 109 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 AC090049.2-201ENST00000550377 109 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 AC025253.1-201ENST00000613623 543 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 AC240442.1-201ENST00000616055 283 ntBASIC1.01□□□□□ -2.25
TRIM3O75382 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
TRIM3O75382 Y_RNA.172-201ENST00000363765 102 ntBASIC1□□□□□ -2.25
TRIM3O75382 Y_RNA.238-201ENST00000364441 102 ntBASIC1□□□□□ -2.25
TRIM3O75382 Y_RNA.361-201ENST00000365515 120 ntBASIC1□□□□□ -2.25
TRIM3O75382 RNU6-1040P-201ENST00000383974 107 ntBASIC1□□□□□ -2.25
TRIM3O75382 SNORD116-13-201ENST00000384408 92 ntBASIC1□□□□□ -2.25
TRIM3O75382 AL451046.2-201ENST00000403074 277 ntBASIC1□□□□□ -2.25
TRIM3O75382 MIR1276-201ENST00000408707 83 ntBASIC1□□□□□ -2.25
TRIM3O75382 RNU2-54P-201ENST00000410299 190 ntBASIC1□□□□□ -2.25
TRIM3O75382 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1□□□□□ -2.25
TRIM3O75382 AC099799.1-201ENST00000439809 192 ntBASIC1□□□□□ -2.25
TRIM3O75382 RPS4XP11-201ENST00000446897 772 ntBASIC1□□□□□ -2.25
TRIM3O75382 COX6CP14-201ENST00000469580 174 ntBASIC1□□□□□ -2.25
TRIM3O75382 AC048334.1-201ENST00000477975 159 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 328.5 ms