Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RNU1-148P-201ENST00000384472 162 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 MIR626-201ENST00000385032 94 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 MIR586-201ENST00000385035 97 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.18□□□□□ -2.06
SMAD6O43541 HMGN2P9-201ENST00000476875 229 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 AC005840.1-201ENST00000498412 377 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 MIR449C-201ENST00000516047 92 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 RN7SKP164-201ENST00000516138 266 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.18□□□□□ -2.06
SMAD6O43541 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.18□□□□□ -2.06
SMAD6O43541 PRELID2P1-201ENST00000552837 301 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 AC090517.3-201ENST00000625170 141 ntBASIC2.18□□□□□ -2.06
SMAD6O43541 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.17□□□□□ -2.06
SMAD6O43541 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.17□□□□□ -2.06
SMAD6O43541 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SMAD6O43541 Y_RNA.24-201ENST00000362508 103 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 Y_RNA.172-201ENST00000363765 102 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RNU6-899P-201ENST00000363947 107 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RNU6-151P-201ENST00000364158 107 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 Y_RNA.215-201ENST00000364204 112 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 Y_RNA.456-201ENST00000384232 111 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 SNORA8.3-201ENST00000384679 139 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 Y_RNA.568-201ENST00000384742 113 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RNU6-578P-201ENST00000390980 103 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 MIR1185-2-201ENST00000408687 86 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RN7SKP284-201ENST00000411002 343 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 EBAG9P1-201ENST00000418955 543 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 AL162725.1-201ENST00000435405 301 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RNU7-141P-201ENST00000459304 62 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 AC055731.1-201ENST00000474387 401 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 SCARNA8-201ENST00000515924 131 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RNU5F-4P-201ENST00000516581 114 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RNU6-453P-201ENST00000516819 85 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.17□□□□□ -2.06
SMAD6O43541 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.17□□□□□ -2.06
SMAD6O43541 MIR4744-201ENST00000581563 82 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 RPL17P51-201ENST00000605218 238 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 AC025754.2-201ENST00000606491 432 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 Y_RNA.778-201ENST00000620203 90 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SMAD6O43541 AL359851.1-201ENST00000569460 4997 ntBASIC2.17□□□□□ -2.06
SMAD6O43541 AC005336.3-201ENST00000623833 2679 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SMAD6O43541 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.16□□□□□ -2.06
SMAD6O43541 Y_RNA.124-201ENST00000363339 93 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU6-103P-201ENST00000363686 107 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU6-969P-201ENST00000383900 105 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU6-1081P-201ENST00000384537 107 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU6-239P-201ENST00000390990 99 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU2-63P-201ENST00000410792 194 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNA5SP233-201ENST00000459153 113 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.16□□□□□ -2.06
SMAD6O43541 RNA5SP272-201ENST00000516095 111 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU6-426P-201ENST00000516464 97 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 RNU2-19P-201ENST00000517288 84 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 MIR4529-201ENST00000578110 78 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 Y_RNA.802-201ENST00000614892 130 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 MIR6132-201ENST00000622083 109 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 AC091895.1-201ENST00000624494 256 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 ZNF720P1-201ENST00000562403 1939 ntBASIC2.16□□□□□ -2.06
SMAD6O43541 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
SMAD6O43541 RNU6-1205P-201ENST00000363625 106 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 RNU6-1117P-201ENST00000384525 104 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 RNU6-1274P-201ENST00000384557 107 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 MIR29B2-201ENST00000385055 81 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 MIR569-201ENST00000385228 96 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 AC245047.8-201ENST00000456455 284 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 RNU7-14P-201ENST00000459331 62 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 SNORA70.12-201ENST00000516084 153 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 RNU7-121P-201ENST00000516604 62 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 SNORA31.25-201ENST00000517242 134 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 MIR4287-201ENST00000579398 78 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 MIR4431-201ENST00000579990 94 ntBASIC2.15□□□□□ -2.07
SMAD6O43541 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SMAD6O43541 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
SMAD6O43541 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SMAD6O43541 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SMAD6O43541 RNU6-944P-201ENST00000364023 107 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 RNU6-959P-201ENST00000384671 107 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 MIR526A2-201ENST00000390198 65 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 SNORA48.3-201ENST00000391081 134 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 Y_RNA.586-201ENST00000391146 98 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 AL355796.1-201ENST00000406706 323 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 MIR1283-1-201ENST00000408494 87 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 AL121890.1-201ENST00000435457 205 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 RNU7-57P-201ENST00000459540 60 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 AC079804.2-201ENST00000490376 200 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 RNU6-1007P-201ENST00000516586 107 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 AC022616.8-201ENST00000533569 253 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 AC109810.1-201ENST00000534066 224 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 MIR3126-201ENST00000577443 74 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 MIR219B-201ENST00000637023 88 ntBASIC2.14□□□□□ -2.07
SMAD6O43541 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.14□□□□□ -2.07
SMAD6O43541 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SMAD6O43541 AP006437.1-201ENST00000641440 3685 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 RNU1-72P-201ENST00000362976 153 ntBASIC2.13□□□□□ -2.07
SMAD6O43541 U8.7-201ENST00000364940 136 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 227 ms