Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.12□□□□□ -2.07
NPC1O15118 ZNF720P1-201ENST00000562403 1939 ntBASIC2.12□□□□□ -2.07
NPC1O15118 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NPC1O15118 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
NPC1O15118 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
NPC1O15118 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.11□□□□□ -2.07
NPC1O15118 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NPC1O15118 AL356292.1-201ENST00000283110 373 ntBASIC2.11□□□□□ -2.07
NPC1O15118 SNORA33-201ENST00000363664 130 ntBASIC2.11□□□□□ -2.07
NPC1O15118 SNORA67.3-201ENST00000384366 140 ntBASIC2.11□□□□□ -2.07
NPC1O15118 AL023284.1-201ENST00000403956 276 ntBASIC2.11□□□□□ -2.07
NPC1O15118 RNU6-855P-201ENST00000410395 104 ntBASIC2.11□□□□□ -2.07
NPC1O15118 RNA5SP100-201ENST00000410903 110 ntBASIC2.11□□□□□ -2.07
NPC1O15118 RNA5SP59-201ENST00000410922 110 ntBASIC2.11□□□□□ -2.07
NPC1O15118 AL591806.2-201ENST00000433122 173 ntBASIC2.11□□□□□ -2.07
NPC1O15118 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.11□□□□□ -2.07
NPC1O15118 MRPS17P9-201ENST00000511924 393 ntBASIC2.11□□□□□ -2.07
NPC1O15118 RNU6-1337P-201ENST00000516525 95 ntBASIC2.11□□□□□ -2.07
NPC1O15118 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.11□□□□□ -2.07
NPC1O15118 RNU7-172P-201ENST00000517125 64 ntBASIC2.11□□□□□ -2.07
NPC1O15118 RPL21P9-201ENST00000556149 474 ntBASIC2.11□□□□□ -2.07
NPC1O15118 MIR4299-201ENST00000577899 72 ntBASIC2.11□□□□□ -2.07
NPC1O15118 MIR4769-201ENST00000584126 77 ntBASIC2.11□□□□□ -2.07
NPC1O15118 AC012433.1-201ENST00000588916 398 ntBASIC2.11□□□□□ -2.07
NPC1O15118 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.11□□□□□ -2.07
NPC1O15118 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.11□□□□□ -2.07
NPC1O15118 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
NPC1O15118 Y_RNA.14-201ENST00000362415 103 ntBASIC2.1□□□□□ -2.07
NPC1O15118 RNU6-112P-201ENST00000363599 104 ntBASIC2.1□□□□□ -2.07
NPC1O15118 RNU6-482P-201ENST00000391068 107 ntBASIC2.1□□□□□ -2.07
NPC1O15118 AC009310.1-201ENST00000414414 451 ntBASIC2.1□□□□□ -2.07
NPC1O15118 RNU7-94P-201ENST00000459576 63 ntBASIC2.1□□□□□ -2.07
NPC1O15118 AC091959.1-201ENST00000495857 238 ntBASIC2.1□□□□□ -2.07
NPC1O15118 RNU6-1278P-201ENST00000516130 107 ntBASIC2.1□□□□□ -2.07
NPC1O15118 AP000942.4-201ENST00000604811 241 ntBASIC2.1□□□□□ -2.07
NPC1O15118 AL359851.1-201ENST00000569460 4997 ntBASIC2.09□□□□□ -2.07
NPC1O15118 Y_RNA.341-201ENST00000365341 102 ntBASIC2.09□□□□□ -2.07
NPC1O15118 Y_RNA.368-201ENST00000365547 113 ntBASIC2.09□□□□□ -2.07
NPC1O15118 Y_RNA.401-201ENST00000383965 117 ntBASIC2.09□□□□□ -2.07
NPC1O15118 SNORA26.9-201ENST00000391322 122 ntBASIC2.09□□□□□ -2.07
NPC1O15118 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.09□□□□□ -2.07
NPC1O15118 AC245047.4-201ENST00000433189 144 ntBASIC2.09□□□□□ -2.07
NPC1O15118 RPL39P38-201ENST00000467018 153 ntBASIC2.09□□□□□ -2.07
NPC1O15118 AL163195.1-201ENST00000496941 348 ntBASIC2.09□□□□□ -2.07
NPC1O15118 SNORA27.4-201ENST00000516650 95 ntBASIC2.09□□□□□ -2.07
NPC1O15118 RNU6-63P-201ENST00000516690 95 ntBASIC2.09□□□□□ -2.07
NPC1O15118 RNA5SP481-201ENST00000516814 122 ntBASIC2.09□□□□□ -2.07
NPC1O15118 RNU7-128P-201ENST00000517247 62 ntBASIC2.09□□□□□ -2.07
NPC1O15118 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.09□□□□□ -2.07
NPC1O15118 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.09□□□□□ -2.07
NPC1O15118 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.09□□□□□ -2.07
NPC1O15118 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.09□□□□□ -2.07
NPC1O15118 U6.108-201ENST00000637764 58 ntBASIC2.09□□□□□ -2.07
NPC1O15118 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
NPC1O15118 Y_RNA.172-201ENST00000363765 102 ntBASIC2.08□□□□□ -2.08
NPC1O15118 Y_RNA.310-201ENST00000365063 113 ntBASIC2.08□□□□□ -2.08
NPC1O15118 RNU6-117P-201ENST00000365415 107 ntBASIC2.08□□□□□ -2.08
NPC1O15118 Y_RNA.456-201ENST00000384232 111 ntBASIC2.08□□□□□ -2.08
NPC1O15118 RNU6-376P-201ENST00000384731 106 ntBASIC2.08□□□□□ -2.08
NPC1O15118 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
NPC1O15118 U8.13-201ENST00000390842 128 ntBASIC2.08□□□□□ -2.08
NPC1O15118 HMGN2P38-201ENST00000423806 265 ntBASIC2.08□□□□□ -2.08
NPC1O15118 RPS26P45-201ENST00000471748 340 ntBASIC2.08□□□□□ -2.08
NPC1O15118 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
NPC1O15118 MIR4713-201ENST00000582691 75 ntBASIC2.08□□□□□ -2.08
NPC1O15118 AL096840.1-201ENST00000603287 93 ntBASIC2.08□□□□□ -2.08
NPC1O15118 AC073413.2-201ENST00000604332 360 ntBASIC2.08□□□□□ -2.08
NPC1O15118 AC010900.2-201ENST00000604508 210 ntBASIC2.08□□□□□ -2.08
NPC1O15118 U2.14-201ENST00000615943 113 ntBASIC2.08□□□□□ -2.08
NPC1O15118 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
NPC1O15118 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
NPC1O15118 Y_RNA.44-201ENST00000362676 108 ntBASIC2.07□□□□□ -2.08
NPC1O15118 SNORA63D-201ENST00000364359 132 ntBASIC2.07□□□□□ -2.08
NPC1O15118 Y_RNA.350-201ENST00000365409 98 ntBASIC2.07□□□□□ -2.08
NPC1O15118 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.07□□□□□ -2.08
NPC1O15118 SNORD116-13-201ENST00000384408 92 ntBASIC2.07□□□□□ -2.08
NPC1O15118 RNU6-950P-201ENST00000384651 107 ntBASIC2.07□□□□□ -2.08
NPC1O15118 Y_RNA.562-201ENST00000384695 113 ntBASIC2.07□□□□□ -2.08
NPC1O15118 MIR562-201ENST00000384894 95 ntBASIC2.07□□□□□ -2.08
NPC1O15118 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.07□□□□□ -2.08
NPC1O15118 RPS20P10-201ENST00000451209 253 ntBASIC2.07□□□□□ -2.08
NPC1O15118 RPL36AP21-201ENST00000490372 323 ntBASIC2.07□□□□□ -2.08
NPC1O15118 RNU6-295P-201ENST00000516901 104 ntBASIC2.07□□□□□ -2.08
NPC1O15118 AC136628.3-201ENST00000521868 290 ntBASIC2.07□□□□□ -2.08
NPC1O15118 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.07□□□□□ -2.08
NPC1O15118 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
NPC1O15118 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NPC1O15118 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.06□□□□□ -2.08
NPC1O15118 Y_RNA.352-201ENST00000365439 102 ntBASIC2.06□□□□□ -2.08
NPC1O15118 RNU6-136P-201ENST00000384663 107 ntBASIC2.06□□□□□ -2.08
NPC1O15118 MIR548H3-201ENST00000408771 118 ntBASIC2.06□□□□□ -2.08
NPC1O15118 RNU2-2P-201ENST00000410396 191 ntBASIC2.06□□□□□ -2.08
NPC1O15118 RNA5SP511-201ENST00000410487 115 ntBASIC2.06□□□□□ -2.08
NPC1O15118 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.06□□□□□ -2.08
NPC1O15118 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.06□□□□□ -2.08
NPC1O15118 AL135790.2-201ENST00000437701 267 ntBASIC2.06□□□□□ -2.08
NPC1O15118 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.06□□□□□ -2.08
NPC1O15118 SNORA31.17-201ENST00000516953 127 ntBASIC2.06□□□□□ -2.08
NPC1O15118 AC004832.4-201ENST00000608952 331 ntBASIC2.06□□□□□ -2.08
NPC1O15118 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 191.4 ms