Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MAPK10-322ENST00000641485 4530 ntBASIC3.25□□□□□ -1.89
SOX1O00570 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SOX1O00570 AL021368.2-201ENST00000606125 5352 ntBASIC3.25□□□□□ -1.89
SOX1O00570 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SOX1O00570 MIR423-201ENST00000362201 94 ntBASIC3.24□□□□□ -1.89
SOX1O00570 Y_RNA.66-201ENST00000362862 102 ntBASIC3.24□□□□□ -1.89
SOX1O00570 RNU6-508P-201ENST00000363231 103 ntBASIC3.24□□□□□ -1.89
SOX1O00570 RNU1-96P-201ENST00000364163 162 ntBASIC3.24□□□□□ -1.89
SOX1O00570 Y_RNA.332-201ENST00000365271 113 ntBASIC3.24□□□□□ -1.89
SOX1O00570 MIRLET7F2-201ENST00000385277 83 ntBASIC3.24□□□□□ -1.89
SOX1O00570 Z98941.1-201ENST00000407764 100 ntBASIC3.24□□□□□ -1.89
SOX1O00570 AL161788.1-201ENST00000441805 169 ntBASIC3.24□□□□□ -1.89
SOX1O00570 CYP2C59P-201ENST00000457790 269 ntBASIC3.24□□□□□ -1.89
SOX1O00570 Y_RNA.651-201ENST00000459380 103 ntBASIC3.24□□□□□ -1.89
SOX1O00570 RNA5SP445-201ENST00000515889 115 ntBASIC3.24□□□□□ -1.89
SOX1O00570 RNA5SP458-201ENST00000516188 119 ntBASIC3.24□□□□□ -1.89
SOX1O00570 RNU6-1146P-201ENST00000516282 102 ntBASIC3.24□□□□□ -1.89
SOX1O00570 RNU6-781P-201ENST00000516377 101 ntBASIC3.24□□□□□ -1.89
SOX1O00570 RNU6-856P-201ENST00000516959 98 ntBASIC3.24□□□□□ -1.89
SOX1O00570 IGKV3-31-201ENST00000523109 329 ntBASIC3.24□□□□□ -1.89
SOX1O00570 AC025166.1-201ENST00000612411 163 ntBASIC3.24□□□□□ -1.89
SOX1O00570 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.24□□□□□ -1.89
SOX1O00570 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.24□□□□□ -1.89
SOX1O00570 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
SOX1O00570 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SOX1O00570 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SOX1O00570 RNU6-283P-201ENST00000364788 107 ntBASIC3.23□□□□□ -1.89
SOX1O00570 MIR95-201ENST00000385072 81 ntBASIC3.23□□□□□ -1.89
SOX1O00570 AC018634.1-201ENST00000437554 401 ntBASIC3.23□□□□□ -1.89
SOX1O00570 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.23□□□□□ -1.89
SOX1O00570 AC007751.1-201ENST00000529260 376 ntBASIC3.23□□□□□ -1.89
SOX1O00570 MIR6817-201ENST00000615588 66 ntBASIC3.23□□□□□ -1.89
SOX1O00570 AC022149.2-201ENST00000621061 203 ntBASIC3.23□□□□□ -1.89
SOX1O00570 U6.98-201ENST00000637157 84 ntBASIC3.23□□□□□ -1.89
SOX1O00570 AC091152.2-201ENST00000591628 2569 ntBASIC3.23□□□□□ -1.89
SOX1O00570 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SOX1O00570 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SOX1O00570 PWAR6-201ENST00000552334 4618 ntBASIC3.22□□□□□ -1.89
SOX1O00570 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SOX1O00570 RNA5SP68-201ENST00000363885 119 ntBASIC3.22□□□□□ -1.89
SOX1O00570 RNU6-743P-201ENST00000364151 106 ntBASIC3.22□□□□□ -1.89
SOX1O00570 RNU6-1164P-201ENST00000364428 107 ntBASIC3.22□□□□□ -1.89
SOX1O00570 Y_RNA.621-201ENST00000411065 96 ntBASIC3.22□□□□□ -1.89
SOX1O00570 RHEBP3-201ENST00000411920 351 ntBASIC3.22□□□□□ -1.89
SOX1O00570 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.22□□□□□ -1.89
SOX1O00570 AF228730.3-201ENST00000436691 102 ntBASIC3.22□□□□□ -1.89
SOX1O00570 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.22□□□□□ -1.89
SOX1O00570 Y_RNA.649-201ENST00000459077 103 ntBASIC3.22□□□□□ -1.89
SOX1O00570 CKS1BP2-201ENST00000497342 240 ntBASIC3.22□□□□□ -1.89
SOX1O00570 SNORA70.19-201ENST00000516717 90 ntBASIC3.22□□□□□ -1.89
SOX1O00570 MIR3199-1-201ENST00000582434 88 ntBASIC3.22□□□□□ -1.89
SOX1O00570 XIST_intron.1-201ENST00000619444 68 ntBASIC3.22□□□□□ -1.89
SOX1O00570 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.22□□□□□ -1.89
SOX1O00570 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SOX1O00570 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SOX1O00570 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SOX1O00570 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.21□□□□□ -1.89
SOX1O00570 RNU6-1292P-201ENST00000383856 107 ntBASIC3.21□□□□□ -1.9
SOX1O00570 RNU6-880P-201ENST00000384526 107 ntBASIC3.21□□□□□ -1.9
SOX1O00570 MIR512-1-201ENST00000384913 84 ntBASIC3.21□□□□□ -1.9
SOX1O00570 MIR548A1-201ENST00000385041 97 ntBASIC3.21□□□□□ -1.9
SOX1O00570 FO393413.1-201ENST00000402892 195 ntBASIC3.21□□□□□ -1.9
SOX1O00570 MIR1287-201ENST00000408492 90 ntBASIC3.21□□□□□ -1.9
SOX1O00570 RNA5SP89-201ENST00000410300 108 ntBASIC3.21□□□□□ -1.9
SOX1O00570 RPS15AP28-201ENST00000435088 386 ntBASIC3.21□□□□□ -1.9
SOX1O00570 AL021397.1-201ENST00000451806 248 ntBASIC3.21□□□□□ -1.9
SOX1O00570 HMGN1P7-201ENST00000491722 313 ntBASIC3.21□□□□□ -1.9
SOX1O00570 RNU6-168P-201ENST00000516189 101 ntBASIC3.21□□□□□ -1.9
SOX1O00570 AC046143.2-201ENST00000609789 160 ntBASIC3.21□□□□□ -1.9
SOX1O00570 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SOX1O00570 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.21□□□□□ -1.9
SOX1O00570 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SOX1O00570 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SOX1O00570 AC008555.8-201ENST00000623602 2168 ntBASIC3.2□□□□□ -1.9
SOX1O00570 Y_RNA.338-201ENST00000365320 114 ntBASIC3.2□□□□□ -1.9
SOX1O00570 Y_RNA.466-201ENST00000384294 113 ntBASIC3.2□□□□□ -1.9
SOX1O00570 RNU6-1186P-201ENST00000410429 97 ntBASIC3.2□□□□□ -1.9
SOX1O00570 Z98742.3-201ENST00000418637 326 ntBASIC3.2□□□□□ -1.9
SOX1O00570 AC060773.1-201ENST00000421698 310 ntBASIC3.2□□□□□ -1.9
SOX1O00570 ARF4P2-201ENST00000430209 526 ntBASIC3.2□□□□□ -1.9
SOX1O00570 HMGN2P34-201ENST00000437647 269 ntBASIC3.2□□□□□ -1.9
SOX1O00570 NDUFA4P2-201ENST00000489989 244 ntBASIC3.2□□□□□ -1.9
SOX1O00570 SEM1P1-201ENST00000506694 209 ntBASIC3.2□□□□□ -1.9
SOX1O00570 RNU7-99P-201ENST00000516271 62 ntBASIC3.2□□□□□ -1.9
SOX1O00570 RNA5SP148-201ENST00000516527 94 ntBASIC3.2□□□□□ -1.9
SOX1O00570 MIR4738-201ENST00000579134 87 ntBASIC3.2□□□□□ -1.9
SOX1O00570 MIR3129-201ENST00000581095 76 ntBASIC3.2□□□□□ -1.9
SOX1O00570 AC073413.2-201ENST00000604332 360 ntBASIC3.2□□□□□ -1.9
SOX1O00570 AC107294.3-201ENST00000609211 526 ntBASIC3.2□□□□□ -1.9
SOX1O00570 MTND5P18-201ENST00000445624 1801 ntBASIC3.2□□□□□ -1.9
SOX1O00570 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.2□□□□□ -1.9
SOX1O00570 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SOX1O00570 AC093010.3-201ENST00000570269 15214 ntBASIC3.19□□□□□ -1.9
SOX1O00570 Y_RNA.242-201ENST00000364473 110 ntBASIC3.19□□□□□ -1.9
SOX1O00570 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SOX1O00570 AC007229.1-201ENST00000590455 412 ntBASIC3.19□□□□□ -1.9
SOX1O00570 AL356280.1-201ENST00000603614 379 ntBASIC3.19□□□□□ -1.9
SOX1O00570 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SOX1O00570 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SOX1O00570 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms