Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 RNU2-31P-201ENST00000516954 155 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 MIR3145-201ENST00000580727 82 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 DEFB117-201ENST00000602356 141 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 U2.14-201ENST00000615943 113 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.188-201ENST00000363952 111 ntBASIC1.81□□□□□ -2.12
SLC52A3Q9NQ40 SNORD114-6-201ENST00000364393 72 ntBASIC1.81□□□□□ -2.12
SLC52A3Q9NQ40 AL356379.1-201ENST00000414105 126 ntBASIC1.81□□□□□ -2.12
SLC52A3Q9NQ40 HMGN2P3-201ENST00000433603 273 ntBASIC1.81□□□□□ -2.12
SLC52A3Q9NQ40 HMGN2P5-201ENST00000436882 273 ntBASIC1.81□□□□□ -2.12
SLC52A3Q9NQ40 AL135790.2-201ENST00000437701 267 ntBASIC1.81□□□□□ -2.12
SLC52A3Q9NQ40 RPL39P38-201ENST00000467018 153 ntBASIC1.81□□□□□ -2.12
SLC52A3Q9NQ40 SCARNA24.2-201ENST00000516968 130 ntBASIC1.81□□□□□ -2.12
SLC52A3Q9NQ40 AC110588.1-201ENST00000559699 137 ntBASIC1.81□□□□□ -2.12
SLC52A3Q9NQ40 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.81□□□□□ -2.12
SLC52A3Q9NQ40 AC006380.1-201ENST00000603598 186 ntBASIC1.81□□□□□ -2.12
SLC52A3Q9NQ40 AC010900.2-201ENST00000604508 210 ntBASIC1.81□□□□□ -2.12
SLC52A3Q9NQ40 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.81□□□□□ -2.12
SLC52A3Q9NQ40 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 ZNF702P-202ENST00000434269 1966 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.60-201ENST00000362831 98 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 SNORD115-3-201ENST00000363100 82 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 RNU4-80P-201ENST00000363200 141 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.124-201ENST00000363339 93 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 RNU6-1164P-201ENST00000364428 107 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.329-201ENST00000365209 107 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 SNORA20B-201ENST00000384220 132 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 SNORA53-201ENST00000391141 249 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 RNU2-61P-201ENST00000411069 191 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 AL158823.1-201ENST00000418441 478 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 AL353689.1-201ENST00000438895 199 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 SNORD65B-201ENST00000459126 73 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 AC091959.1-201ENST00000495857 238 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 MIR4287-201ENST00000579398 78 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 MIR3684-201ENST00000579779 74 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 MIR3128-201ENST00000581957 66 ntBASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.8□□□□□ -2.12
SLC52A3Q9NQ40 AL359851.1-201ENST00000569460 4997 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.352-201ENST00000365439 102 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 AC008134.1-201ENST00000420943 193 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 AC060773.1-201ENST00000421698 310 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 BX510359.4-201ENST00000423750 193 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 SUMO1P2-201ENST00000452524 304 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 MTND4LP30-201ENST00000454092 297 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 RNU1-131P-201ENST00000458943 161 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 AC108210.2-201ENST00000503681 201 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 RNU6-1023P-201ENST00000516137 106 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 RNU6-1271P-201ENST00000517049 105 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 RPL21P9-201ENST00000556149 474 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 MIR3671-201ENST00000580455 88 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 U1.36-201ENST00000620684 176 ntBASIC1.79□□□□□ -2.12
SLC52A3Q9NQ40 UBE2WP1-201ENST00000362030 340 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.20-201ENST00000362479 113 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 SNORD114-7-201ENST00000362520 77 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 SNORA27.1-201ENST00000362604 124 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 RNU6-1266P-201ENST00000362794 105 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 RNU6-379P-201ENST00000363813 104 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.416-201ENST00000384014 113 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.477-201ENST00000384352 108 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.539-201ENST00000384635 107 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 SNORD58.1-201ENST00000391313 66 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 MIR873-201ENST00000401120 77 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 AL603910.2-201ENST00000407268 136 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 MIR548H3-201ENST00000408771 118 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 AC010598.1-201ENST00000510378 103 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 RNU6-191P-201ENST00000516295 94 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 MIR514B-201ENST00000516774 80 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 MIR3169-201ENST00000578032 83 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 MIR4769-201ENST00000584126 77 ntBASIC1.78□□□□□ -2.12
SLC52A3Q9NQ40 AL159152.1-201ENST00000635019 2587 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 SNORA25.1-201ENST00000362326 128 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 RNU6-23P-201ENST00000363283 107 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 RNU6-324P-201ENST00000363957 106 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 Y_RNA.275-201ENST00000364726 110 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 RNU6-1240P-201ENST00000365155 104 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 RNU11-3P-201ENST00000391111 133 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 AC019129.1-201ENST00000403786 261 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 MIR1289-2-201ENST00000408360 111 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 AL591806.2-201ENST00000433122 173 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 HMGN2P34-201ENST00000437647 269 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 Y_RNA.673-201ENST00000516306 88 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 AC015712.3-201ENST00000559380 164 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 MIR4643-201ENST00000577473 78 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 AL353149.1-201ENST00000610667 244 ntBASIC1.77□□□□□ -2.13
SLC52A3Q9NQ40 AL627230.6-201ENST00000611129 280 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms