Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 Y_RNA.316-201ENST00000365118 111 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 SNORD6-201ENST00000365444 73 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 SNORA26.6-201ENST00000391256 115 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 Y_RNA.609-201ENST00000410669 89 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 AL445685.2-201ENST00000422551 342 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 RNU7-2P-201ENST00000516096 62 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 RNA5SP49-201ENST00000516450 115 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 RNA5SP519-201ENST00000516480 119 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 SNORA70.19-201ENST00000516717 90 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 RNU6-958P-201ENST00000516995 106 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR4310-201ENST00000582950 57 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 RNU6-86P-201ENST00000606534 107 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR4791-201ENST00000607666 84 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR486-1-201ENST00000612171 68 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR6862-1-201ENST00000613016 70 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR6862-2-201ENST00000614755 70 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR6717-201ENST00000622747 73 ntBASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP3-1Q9BYR8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 RNU6-1019P-201ENST00000364424 107 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 RPS12P2-201ENST00000439728 269 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 AC006011.1-201ENST00000442758 349 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 RPS29P28-201ENST00000446439 141 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 RNU7-73P-201ENST00000458743 63 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 RN7SL98P-201ENST00000462271 300 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 RN7SL93P-201ENST00000463035 293 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 RN7SL354P-201ENST00000469282 294 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 AC099522.1-202ENST00000514718 367 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR2114-201ENST00000516645 80 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 IGLV2-28-201ENST00000520681 304 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 AC005786.1-201ENST00000588553 154 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR7155-201ENST00000615925 56 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 U4atac.1-201ENST00000618345 95 ntBASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
KRTAP3-1Q9BYR8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 IPO8P1-201ENST00000455509 3109 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 Y_RNA.247-201ENST00000364500 92 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 SNORA24-201ENST00000384096 131 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR516B2-201ENST00000385190 85 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR136-201ENST00000385207 82 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 RNA5SP332-201ENST00000391063 115 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 U8.16-201ENST00000391279 133 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 SNORA11.5-201ENST00000408163 128 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 AL590762.4-201ENST00000425885 253 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 RNU7-12P-201ENST00000516030 62 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 AC007336.1-201ENST00000576365 3828 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR4436B2-201ENST00000581415 91 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR4436B1-201ENST00000583272 91 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 FAM25E-202ENST00000608562 189 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR6780A-201ENST00000615089 68 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 MIR7703-201ENST00000620784 77 ntBASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRTAP3-1Q9BYR8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms