Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC005357.1-201ENST00000588399 301 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 Y_RNA.771-201ENST00000598668 102 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 AC073413.2-201ENST00000604332 360 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.3□□□□□ -2.04
NKX6-1P78426 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 Y_RNA.789-201ENST00000622480 102 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 snoU18.1-201ENST00000629629 71 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 AC068647.2-201ENST00000637380 353 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 ZNF658B-202ENST00000615961 3375 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NKX6-1P78426 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
NKX6-1P78426 RNA5SP393-201ENST00000363423 117 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 RNU6-899P-201ENST00000363947 107 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.29□□□□□ -2.04
NKX6-1P78426 SNORD116-13-201ENST00000384408 92 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 RNU6-136P-201ENST00000384663 107 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 SNORA67.4-201ENST00000384688 142 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 MIR562-201ENST00000384894 95 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 MIR520G-201ENST00000385064 90 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 SNORD23.1-201ENST00000408212 104 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 RNA5SP511-201ENST00000410487 115 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 AL162725.1-201ENST00000435405 301 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 MTND2P29-201ENST00000438595 412 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 AC069257.2-201ENST00000441819 155 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 RNU4-71P-201ENST00000516258 113 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 RNA5SP282-201ENST00000516355 108 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.29□□□□□ -2.04
NKX6-1P78426 AC004832.4-201ENST00000608952 331 ntBASIC2.29□□□□□ -2.04
NKX6-1P78426 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NKX6-1P78426 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NKX6-1P78426 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NKX6-1P78426 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NKX6-1P78426 Y_RNA.122-201ENST00000363331 96 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 Y_RNA.172-201ENST00000363765 102 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 RNU6-1019P-201ENST00000364424 107 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 RNU6-338P-201ENST00000383888 105 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 RNU6-1323P-201ENST00000384025 107 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 RNU6-763P-201ENST00000390865 106 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 MTCO2P33-201ENST00000402100 465 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 SNORA3.2-201ENST00000408221 125 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.28□□□□□ -2.04
NKX6-1P78426 RNU6-388P-201ENST00000517012 105 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 RNU6-389P-201ENST00000517048 105 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 RNU6-111P-201ENST00000517179 105 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 AL049779.4-201ENST00000604500 156 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 AC073349.3-201ENST00000617616 186 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 AC141273.2-201ENST00000618989 130 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 AC022513.1-201ENST00000624512 117 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 CTSLP2-204ENST00000629029 392 ntBASIC2.28□□□□□ -2.04
NKX6-1P78426 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.27□□□□□ -2.05
NKX6-1P78426 MIR6073-201ENST00000352083 89 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 RNU6-211P-201ENST00000384047 107 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 Y_RNA.539-201ENST00000384635 107 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 SNORA48.1-201ENST00000390879 135 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 SNORD58.1-201ENST00000391313 66 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 RN7SKP192-201ENST00000411291 327 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 AL135786.1-201ENST00000415892 214 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 AL135790.2-201ENST00000437701 267 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 AC011753.1-201ENST00000451001 220 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 Y_RNA.637-201ENST00000459424 114 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 AL163195.1-201ENST00000496941 348 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 RNU2-19P-201ENST00000517288 84 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 AC015720.1-201ENST00000565251 277 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 MIR4643-201ENST00000577473 78 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 MIR4635-201ENST00000583759 79 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 MIR203B-201ENST00000636080 86 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.27□□□□□ -2.05
NKX6-1P78426 AC080100.1-201ENST00000624239 5356 ntBASIC2.27□□□□□ -2.05
NKX6-1P78426 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
NKX6-1P78426 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.26□□□□□ -2.05
NKX6-1P78426 SNORA33-201ENST00000363664 130 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 Y_RNA.269-201ENST00000364685 89 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 RNU1-138P-201ENST00000384093 164 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 SNORA26.5-201ENST00000391215 123 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 RNA5SP181-201ENST00000410246 98 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 RNA5SP501-201ENST00000410990 112 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 RNA5SP450-201ENST00000411206 102 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 Z98742.3-201ENST00000418637 326 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX6-1P78426 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.26□□□□□ -2.05
NKX6-1P78426 AC104332.1-201ENST00000440471 797 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 RPS26P45-201ENST00000471748 340 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX6-1P78426 HMGB3P3-201ENST00000510526 400 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 RNU7-115P-201ENST00000516433 55 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 RNU7-128P-201ENST00000517247 62 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 MIR5692C2-201ENST00000577959 77 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 MIR4282-201ENST00000583613 67 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 POLR3GP1-201ENST00000594073 261 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 AL442067.1-201ENST00000613261 223 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 AC013791.1-201ENST00000616619 62 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 MIR548AY-201ENST00000617669 107 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 MIR6079-201ENST00000635807 62 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 FO624990.1-201ENST00000636373 85 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 AC134026.1-201ENST00000623249 2239 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 AC018630.2-201ENST00000534866 2403 ntBASIC2.26□□□□□ -2.05
NKX6-1P78426 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
NKX6-1P78426 RNU6-1048P-201ENST00000364054 107 ntBASIC2.25□□□□□ -2.05
NKX6-1P78426 RNA5SP425-201ENST00000410336 112 ntBASIC2.25□□□□□ -2.05
NKX6-1P78426 U8.19-201ENST00000459095 133 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 216.3 ms