Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.38□□□□□ -2.47
TPM4P67936 SNORD45.3-201ENST00000363836 72 ntBASIC-0.38□□□□□ -2.47
TPM4P67936 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.38□□□□□ -2.47
TPM4P67936 AC015818.7-201ENST00000428754 109 ntBASIC-0.38□□□□□ -2.47
TPM4P67936 AC087499.7-201ENST00000441958 109 ntBASIC-0.38□□□□□ -2.47
TPM4P67936 RPL30P10-201ENST00000488148 337 ntBASIC-0.38□□□□□ -2.47
TPM4P67936 SNORA19.2-201ENST00000516013 114 ntBASIC-0.38□□□□□ -2.47
TPM4P67936 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.38□□□□□ -2.47
TPM4P67936 MRPS36P3-201ENST00000519284 130 ntBASIC-0.38□□□□□ -2.47
TPM4P67936 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.38□□□□□ -2.47
TPM4P67936 AC106754.1-201ENST00000562632 1513 ntBASIC-0.38□□□□□ -2.47
TPM4P67936 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.39□□□□□ -2.47
TPM4P67936 MIR610-201ENST00000385139 96 ntBASIC-0.39□□□□□ -2.47
TPM4P67936 CYCSP46-201ENST00000423569 204 ntBASIC-0.39□□□□□ -2.47
TPM4P67936 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.39□□□□□ -2.47
TPM4P67936 snoU13.18-201ENST00000459483 104 ntBASIC-0.39□□□□□ -2.47
TPM4P67936 AC092989.1-201ENST00000481235 277 ntBASIC-0.39□□□□□ -2.47
TPM4P67936 AC046134.1-201ENST00000514454 666 ntBASIC-0.39□□□□□ -2.47
TPM4P67936 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
TPM4P67936 MIR644A-201ENST00000385262 94 ntBASIC-0.4□□□□□ -2.47
TPM4P67936 RNU6-700P-201ENST00000391043 107 ntBASIC-0.4□□□□□ -2.47
TPM4P67936 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.4□□□□□ -2.47
TPM4P67936 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.4□□□□□ -2.47
TPM4P67936 RN7SKP287-201ENST00000516546 266 ntBASIC-0.4□□□□□ -2.47
TPM4P67936 SNORD45.4-201ENST00000516629 73 ntBASIC-0.4□□□□□ -2.47
TPM4P67936 MIR548AR-201ENST00000582191 57 ntBASIC-0.4□□□□□ -2.47
TPM4P67936 AC020891.4-201ENST00000605745 93 ntBASIC-0.4□□□□□ -2.47
TPM4P67936 RNU4-28P-201ENST00000364739 141 ntBASIC-0.41□□□□□ -2.48
TPM4P67936 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.41□□□□□ -2.48
TPM4P67936 SNORD28B-201ENST00000390993 75 ntBASIC-0.41□□□□□ -2.48
TPM4P67936 RNU2-54P-201ENST00000410299 190 ntBASIC-0.41□□□□□ -2.48
TPM4P67936 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.41□□□□□ -2.48
TPM4P67936 AL354751.2-201ENST00000415471 210 ntBASIC-0.41□□□□□ -2.48
TPM4P67936 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.41□□□□□ -2.48
TPM4P67936 AL118558.2-201ENST00000556294 238 ntBASIC-0.41□□□□□ -2.48
TPM4P67936 AC090897.1-201ENST00000580909 226 ntBASIC-0.41□□□□□ -2.48
TPM4P67936 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.41□□□□□ -2.48
TPM4P67936 SNORD113-7-201ENST00000363762 77 ntBASIC-0.42□□□□□ -2.48
TPM4P67936 MIR522-201ENST00000385071 87 ntBASIC-0.42□□□□□ -2.48
TPM4P67936 RNA5SP63-201ENST00000391225 112 ntBASIC-0.42□□□□□ -2.48
TPM4P67936 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.42□□□□□ -2.48
TPM4P67936 AC073464.1-201ENST00000429823 534 ntBASIC-0.42□□□□□ -2.48
TPM4P67936 HMGN2P32-201ENST00000444648 269 ntBASIC-0.42□□□□□ -2.48
TPM4P67936 MTCO2P30-201ENST00000503662 364 ntBASIC-0.42□□□□□ -2.48
TPM4P67936 RNU6-63P-201ENST00000516690 95 ntBASIC-0.42□□□□□ -2.48
TPM4P67936 AC134698.4-201ENST00000523451 826 ntBASIC-0.42□□□□□ -2.48
TPM4P67936 AC090616.2-202ENST00000584248 222 ntBASIC-0.42□□□□□ -2.48
TPM4P67936 AC005828.6-201ENST00000606610 232 ntBASIC-0.42□□□□□ -2.48
TPM4P67936 U6.115-201ENST00000636045 103 ntBASIC-0.42□□□□□ -2.48
TPM4P67936 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.43□□□□□ -2.48
TPM4P67936 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.43□□□□□ -2.48
TPM4P67936 MTCO1P20-201ENST00000425366 358 ntBASIC-0.43□□□□□ -2.48
TPM4P67936 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.43□□□□□ -2.48
TPM4P67936 AC116353.2-201ENST00000505332 712 ntBASIC-0.43□□□□□ -2.48
TPM4P67936 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.43□□□□□ -2.48
TPM4P67936 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.43□□□□□ -2.48
TPM4P67936 MIR3678-201ENST00000578455 94 ntBASIC-0.43□□□□□ -2.48
TPM4P67936 AP000753.3-201ENST00000604083 169 ntBASIC-0.43□□□□□ -2.48
TPM4P67936 AL354950.2-201ENST00000617939 290 ntBASIC-0.43□□□□□ -2.48
TPM4P67936 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.44□□□□□ -2.48
TPM4P67936 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.44□□□□□ -2.48
TPM4P67936 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.44□□□□□ -2.48
TPM4P67936 RNU6-756P-201ENST00000383997 107 ntBASIC-0.44□□□□□ -2.48
TPM4P67936 MIR145-201ENST00000384967 88 ntBASIC-0.44□□□□□ -2.48
TPM4P67936 RNU6-205P-201ENST00000390858 107 ntBASIC-0.44□□□□□ -2.48
TPM4P67936 MIR938-201ENST00000401216 83 ntBASIC-0.44□□□□□ -2.48
TPM4P67936 MIR548H2-201ENST00000408874 88 ntBASIC-0.44□□□□□ -2.48
TPM4P67936 RNA5SP268-201ENST00000516828 124 ntBASIC-0.44□□□□□ -2.48
TPM4P67936 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.44□□□□□ -2.48
TPM4P67936 MIR3124-201ENST00000582636 67 ntBASIC-0.44□□□□□ -2.48
TPM4P67936 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.44□□□□□ -2.48
TPM4P67936 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.45□□□□□ -2.48
TPM4P67936 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.45□□□□□ -2.48
TPM4P67936 PCNPP3-201ENST00000393579 471 ntBASIC-0.45□□□□□ -2.48
TPM4P67936 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.45□□□□□ -2.48
TPM4P67936 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.45□□□□□ -2.48
TPM4P67936 MIR3913-1-201ENST00000577744 102 ntBASIC-0.45□□□□□ -2.48
TPM4P67936 AC073534.2-201ENST00000620377 381 ntBASIC-0.45□□□□□ -2.48
TPM4P67936 SNORD114-7-201ENST00000362520 77 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 RNU6-790P-201ENST00000384479 105 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 MIR1287-201ENST00000408492 90 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 SUMO1P2-201ENST00000452524 304 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.46□□□□□ -2.48
TPM4P67936 RNU7-187P-201ENST00000458985 68 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.46□□□□□ -2.48
TPM4P67936 AC026371.1-201ENST00000551867 419 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.46□□□□□ -2.48
TPM4P67936 RN7SL793P-201ENST00000583259 296 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 MIR4264-201ENST00000583520 66 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 FAM157A-202ENST00000615155 405 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 AC072046.2-201ENST00000618366 268 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 MIR6755-201ENST00000619993 66 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 MIR1295B-201ENST00000636144 60 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.46□□□□□ -2.48
TPM4P67936 FGF7P2-201ENST00000332473 296 ntBASIC-0.47□□□□□ -2.48
TPM4P67936 SNORA36.1-201ENST00000363424 132 ntBASIC-0.47□□□□□ -2.48
TPM4P67936 RNU6-281P-201ENST00000384212 103 ntBASIC-0.47□□□□□ -2.48
TPM4P67936 MIR518E-201ENST00000385252 88 ntBASIC-0.47□□□□□ -2.48
TPM4P67936 ELOCP21-201ENST00000412558 336 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms