Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 Z96811.1-201ENST00000445880 108 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 RPS29P21-201ENST00000496272 170 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 AC097462.1-201ENST00000514125 324 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 RN7SKP43-201ENST00000516173 320 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 SNORA48.11-201ENST00000517015 89 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 MIR4435-1-201ENST00000582552 80 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 AL365222.1-201ENST00000614661 98 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 MIR6844-201ENST00000637122 62 ntBASIC2.82□□□□□ -1.96
SLC6A11P48066 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SLC6A11P48066 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.82□□□□□ -1.96
SLC6A11P48066 RNU1-22P-201ENST00000363334 158 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 Y_RNA.420-201ENST00000384043 110 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 RNY3P5-201ENST00000384127 102 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 RNU6-768P-201ENST00000384683 107 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 AC123900.1-201ENST00000420390 96 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 MTND4LP9-201ENST00000427694 174 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 MTCO1P44-201ENST00000441935 243 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 RPS27P1-201ENST00000450552 247 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 AC093259.1-201ENST00000509755 300 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 RNU6-479P-201ENST00000516348 105 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 RNU6-971P-201ENST00000516920 106 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 MIR3117-201ENST00000584034 78 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 ZNF861P-201ENST00000588126 639 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 AL929325.1-201ENST00000603096 117 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 AL049861.1-201ENST00000603130 150 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 AL356280.1-201ENST00000603614 379 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.81□□□□□ -1.96
SLC6A11P48066 AC012640.5-201ENST00000623897 319 ntBASIC2.81□□□□□ -1.96
SLC6A11P48066 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SLC6A11P48066 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
SLC6A11P48066 RNU6-859P-201ENST00000362728 107 ntBASIC2.8□□□□□ -1.96
SLC6A11P48066 RNU6-674P-201ENST00000363831 107 ntBASIC2.8□□□□□ -1.96
SLC6A11P48066 RNU6-1080P-201ENST00000383982 107 ntBASIC2.8□□□□□ -1.96
SLC6A11P48066 SNORA72-201ENST00000384339 132 ntBASIC2.8□□□□□ -1.96
SLC6A11P48066 SNORA22C-201ENST00000384614 134 ntBASIC2.8□□□□□ -1.96
SLC6A11P48066 MIR9-1-201ENST00000385198 89 ntBASIC2.8□□□□□ -1.96
SLC6A11P48066 RNU6-220P-201ENST00000390919 107 ntBASIC2.8□□□□□ -1.96
SLC6A11P48066 RNA5SP21-201ENST00000410917 96 ntBASIC2.8□□□□□ -1.96
SLC6A11P48066 CYCSP49-201ENST00000420810 319 ntBASIC2.8□□□□□ -1.96
SLC6A11P48066 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.8□□□□□ -1.96
SLC6A11P48066 RPS4XP11-201ENST00000446897 772 ntBASIC2.8□□□□□ -1.96
SLC6A11P48066 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.8□□□□□ -1.96
SLC6A11P48066 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.8□□□□□ -1.96
SLC6A11P48066 MIR4506-201ENST00000584693 77 ntBASIC2.8□□□□□ -1.96
SLC6A11P48066 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.8□□□□□ -1.96
SLC6A11P48066 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.8□□□□□ -1.96
SLC6A11P48066 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SLC6A11P48066 RNA5SP68-201ENST00000363885 119 ntBASIC2.79□□□□□ -1.96
SLC6A11P48066 Y_RNA.332-201ENST00000365271 113 ntBASIC2.79□□□□□ -1.96
SLC6A11P48066 Y_RNA.393-201ENST00000383936 102 ntBASIC2.79□□□□□ -1.96
SLC6A11P48066 RNA5SP496-201ENST00000391240 109 ntBASIC2.79□□□□□ -1.96
SLC6A11P48066 RN7SKP101-201ENST00000411376 320 ntBASIC2.79□□□□□ -1.96
SLC6A11P48066 RNU6-1211P-201ENST00000459179 105 ntBASIC2.79□□□□□ -1.96
SLC6A11P48066 AP004217.1-201ENST00000480579 346 ntBASIC2.79□□□□□ -1.96
SLC6A11P48066 RNU6-856P-201ENST00000516959 98 ntBASIC2.79□□□□□ -1.96
SLC6A11P48066 RNU6-667P-201ENST00000517186 102 ntBASIC2.79□□□□□ -1.96
SLC6A11P48066 MIR3945-201ENST00000581853 98 ntBASIC2.79□□□□□ -1.96
SLC6A11P48066 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.79□□□□□ -1.96
SLC6A11P48066 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
SLC6A11P48066 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.78□□□□□ -1.96
SLC6A11P48066 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.78□□□□□ -1.96
SLC6A11P48066 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SLC6A11P48066 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.78□□□□□ -1.96
SLC6A11P48066 RNU6-1290P-201ENST00000362957 109 ntBASIC2.78□□□□□ -1.96
SLC6A11P48066 RNU6-1180P-201ENST00000364935 107 ntBASIC2.78□□□□□ -1.96
SLC6A11P48066 RNU6-588P-201ENST00000410281 105 ntBASIC2.78□□□□□ -1.96
SLC6A11P48066 RNU6-1186P-201ENST00000410429 97 ntBASIC2.78□□□□□ -1.96
SLC6A11P48066 RNU4-43P-201ENST00000410628 137 ntBASIC2.78□□□□□ -1.96
SLC6A11P48066 UBBP3-201ENST00000445497 241 ntBASIC2.78□□□□□ -1.96
SLC6A11P48066 SNRPGP8-201ENST00000454064 226 ntBASIC2.78□□□□□ -1.96
SLC6A11P48066 AC003982.1-202ENST00000469928 248 ntBASIC2.78□□□□□ -1.96
SLC6A11P48066 RNA5SP385-201ENST00000515947 110 ntBASIC2.78□□□□□ -1.96
SLC6A11P48066 RPL23AP91-201ENST00000569211 455 ntBASIC2.78□□□□□ -1.96
SLC6A11P48066 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SLC6A11P48066 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.77□□□□□ -1.97
SLC6A11P48066 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
SLC6A11P48066 Y_RNA.203-201ENST00000364106 102 ntBASIC2.77□□□□□ -1.97
SLC6A11P48066 Y_RNA.542-201ENST00000384641 111 ntBASIC2.77□□□□□ -1.97
SLC6A11P48066 MIR561-201ENST00000385216 97 ntBASIC2.77□□□□□ -1.97
SLC6A11P48066 RNU6-1168P-201ENST00000390831 104 ntBASIC2.77□□□□□ -1.97
SLC6A11P48066 RNU6-460P-201ENST00000391158 108 ntBASIC2.77□□□□□ -1.97
SLC6A11P48066 Y_RNA.621-201ENST00000411065 96 ntBASIC2.77□□□□□ -1.97
SLC6A11P48066 AC060773.1-201ENST00000421698 310 ntBASIC2.77□□□□□ -1.97
SLC6A11P48066 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.77□□□□□ -1.97
SLC6A11P48066 AC008267.6-201ENST00000441664 139 ntBASIC2.77□□□□□ -1.97
SLC6A11P48066 RNA5SP148-201ENST00000516527 94 ntBASIC2.77□□□□□ -1.97
SLC6A11P48066 SNORA31.26-201ENST00000517250 137 ntBASIC2.77□□□□□ -1.97
SLC6A11P48066 MIR3646-201ENST00000578301 84 ntBASIC2.77□□□□□ -1.97
SLC6A11P48066 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SLC6A11P48066 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SLC6A11P48066 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SLC6A11P48066 RNU6-461P-201ENST00000364195 107 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 SNORD56.5-201ENST00000364281 72 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 RNA5SP125-201ENST00000364843 120 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 Y_RNA.432-201ENST00000384087 111 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 MIR592-201ENST00000384959 97 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 MIR627-201ENST00000384979 97 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 RNU6-735P-201ENST00000410612 107 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 RNU2-48P-201ENST00000410694 191 ntBASIC2.76□□□□□ -1.97
SLC6A11P48066 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms