Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR548AR-201ENST00000582191 57 ntBASIC-0.45□□□□□ -2.48
CXCL1P09341 AL022161.1-201ENST00000604390 213 ntBASIC-0.45□□□□□ -2.48
CXCL1P09341 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.45□□□□□ -2.48
CXCL1P09341 SNORD114-7-201ENST00000362520 77 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 RNU6-756P-201ENST00000383997 107 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 RNU6-929P-201ENST00000384429 107 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 RNU6-456P-201ENST00000384493 107 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 RNU6-269P-201ENST00000391077 97 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 AL008987.1-201ENST00000415528 237 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.46□□□□□ -2.48
CXCL1P09341 AC015818.7-201ENST00000428754 109 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 MTND4P32-201ENST00000437189 1237 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 AC087499.7-201ENST00000441958 109 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 SUMO1P2-201ENST00000452524 304 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 SNORD4A-201ENST00000459174 72 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 SNORD45.4-201ENST00000516629 73 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.46□□□□□ -2.48
CXCL1P09341 MTND4P7-201ENST00000523876 130 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.46□□□□□ -2.48
CXCL1P09341 AL136370.1-201ENST00000608166 691 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 AC087683.2-201ENST00000611384 326 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 AP001506.1-201ENST00000615444 211 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 AC103705.1-201ENST00000619013 241 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 AC009248.2-201ENST00000619826 254 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 AC006504.8-201ENST00000621046 635 ntBASIC-0.46□□□□□ -2.48
CXCL1P09341 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.47□□□□□ -2.48
CXCL1P09341 MIR522-201ENST00000385071 87 ntBASIC-0.47□□□□□ -2.48
CXCL1P09341 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.47□□□□□ -2.48
CXCL1P09341 AL390729.2-201ENST00000416137 156 ntBASIC-0.47□□□□□ -2.48
CXCL1P09341 CCDC34P1-201ENST00000507441 517 ntBASIC-0.47□□□□□ -2.48
CXCL1P09341 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.47□□□□□ -2.48
CXCL1P09341 AC005828.6-201ENST00000606610 232 ntBASIC-0.47□□□□□ -2.48
CXCL1P09341 AC016597.2-201ENST00000613256 341 ntBASIC-0.47□□□□□ -2.48
CXCL1P09341 SNORA18.1-201ENST00000363418 128 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 RNU6-82P-201ENST00000363970 107 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 RNA5SP117-201ENST00000365294 118 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 MIR643-201ENST00000385267 97 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 RNU6-747P-201ENST00000390928 104 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 SNORD28B-201ENST00000390993 75 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 RNU6-241P-201ENST00000391148 104 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.48□□□□□ -2.49
CXCL1P09341 PDCL2P1-201ENST00000419302 352 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 AC133104.1-201ENST00000429100 218 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 Z82188.1-201ENST00000436709 154 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
CXCL1P09341 MTATP6P14-201ENST00000455189 673 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 RNU6-189P-201ENST00000516120 101 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 RNU6-320P-201ENST00000516511 106 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 RNU6-107P-201ENST00000516643 102 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 RNU6-782P-201ENST00000516852 104 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.48□□□□□ -2.49
CXCL1P09341 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.48□□□□□ -2.49
CXCL1P09341 MIR4424-201ENST00000585257 86 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 AC005176.2-201ENST00000596933 147 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 AC008608.1-201ENST00000603910 127 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 AC098679.4-201ENST00000624241 654 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.48□□□□□ -2.49
CXCL1P09341 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-282P-201ENST00000365357 103 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-933P-201ENST00000384424 107 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-541P-201ENST00000384709 110 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 MIR106A-201ENST00000384870 81 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 MIR122-201ENST00000385044 85 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-205P-201ENST00000390858 107 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 AL590002.1-201ENST00000406554 418 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-447P-201ENST00000410293 104 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-355P-201ENST00000410427 104 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-791P-201ENST00000410467 104 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-705P-201ENST00000410601 104 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-860P-201ENST00000410860 104 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 RNU6-785P-201ENST00000411324 104 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.49□□□□□ -2.49
CXCL1P09341 Z99497.1-201ENST00000421282 135 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 AC069271.1-201ENST00000445577 156 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.49□□□□□ -2.49
CXCL1P09341 HMGN1P10-201ENST00000474557 553 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 AC133485.4-201ENST00000561835 220 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 UBL5P4-201ENST00000562584 236 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.49□□□□□ -2.49
CXCL1P09341 AC100830.2-201ENST00000581636 240 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 AC005730.3-201ENST00000583067 366 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 U6.90-201ENST00000614007 104 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 U6.70-201ENST00000620287 104 ntBASIC-0.49□□□□□ -2.49
CXCL1P09341 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.5□□□□□ -2.49
CXCL1P09341 SNORA40.4-201ENST00000390971 128 ntBASIC-0.5□□□□□ -2.49
CXCL1P09341 AC092447.3-201ENST00000426027 686 ntBASIC-0.5□□□□□ -2.49
CXCL1P09341 BTF3P11-201ENST00000426582 477 ntBASIC-0.5□□□□□ -2.49
CXCL1P09341 RNU7-165P-201ENST00000458864 60 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 243.5 ms