Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.96□□□□□ -1.94
SYPP08247 RNU6-1299P-201ENST00000516316 100 ntBASIC2.96□□□□□ -1.94
SYPP08247 RNU6-659P-201ENST00000516454 104 ntBASIC2.96□□□□□ -1.94
SYPP08247 RNU6-856P-201ENST00000516959 98 ntBASIC2.96□□□□□ -1.94
SYPP08247 SNORA48.11-201ENST00000517015 89 ntBASIC2.96□□□□□ -1.94
SYPP08247 RNU7-172P-201ENST00000517125 64 ntBASIC2.96□□□□□ -1.94
SYPP08247 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.96□□□□□ -1.94
SYPP08247 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.96□□□□□ -1.94
SYPP08247 MIR6715A-201ENST00000615929 79 ntBASIC2.96□□□□□ -1.94
SYPP08247 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.95□□□□□ -1.94
SYPP08247 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SYPP08247 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SYPP08247 MIR340-201ENST00000362125 95 ntBASIC2.95□□□□□ -1.94
SYPP08247 RNU6-915P-201ENST00000364943 103 ntBASIC2.95□□□□□ -1.94
SYPP08247 RNU2-48P-201ENST00000410694 191 ntBASIC2.95□□□□□ -1.94
SYPP08247 AC092185.1-201ENST00000491371 97 ntBASIC2.95□□□□□ -1.94
SYPP08247 SNORD77.4-201ENST00000516158 81 ntBASIC2.95□□□□□ -1.94
SYPP08247 RNU1-143P-201ENST00000516296 146 ntBASIC2.95□□□□□ -1.94
SYPP08247 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.95□□□□□ -1.94
SYPP08247 MIR2681-201ENST00000581814 105 ntBASIC2.95□□□□□ -1.94
SYPP08247 AL356280.1-201ENST00000603614 379 ntBASIC2.95□□□□□ -1.94
SYPP08247 U1.23-201ENST00000610293 146 ntBASIC2.95□□□□□ -1.94
SYPP08247 U2.20-201ENST00000613956 192 ntBASIC2.95□□□□□ -1.94
SYPP08247 RNU1-68P-201ENST00000615382 146 ntBASIC2.95□□□□□ -1.94
SYPP08247 uc_338.4-201ENST00000616635 176 ntBASIC2.95□□□□□ -1.94
SYPP08247 U1.39-201ENST00000621562 146 ntBASIC2.95□□□□□ -1.94
SYPP08247 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.95□□□□□ -1.94
SYPP08247 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.95□□□□□ -1.94
SYPP08247 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SYPP08247 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.95□□□□□ -1.94
SYPP08247 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SYPP08247 AC096644.4-201ENST00000563417 2912 ntBASIC2.94□□□□□ -1.94
SYPP08247 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SYPP08247 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
SYPP08247 AC062016.1-201ENST00000355719 319 ntBASIC2.94□□□□□ -1.94
SYPP08247 RNU4-82P-201ENST00000362443 140 ntBASIC2.94□□□□□ -1.94
SYPP08247 RNU6-1336P-201ENST00000383886 109 ntBASIC2.94□□□□□ -1.94
SYPP08247 Y_RNA.563-201ENST00000384707 108 ntBASIC2.94□□□□□ -1.94
SYPP08247 Y_RNA.584-201ENST00000391090 114 ntBASIC2.94□□□□□ -1.94
SYPP08247 AC087499.2-201ENST00000432861 149 ntBASIC2.94□□□□□ -1.94
SYPP08247 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.94□□□□□ -1.94
SYPP08247 SNORD11-201ENST00000459124 84 ntBASIC2.94□□□□□ -1.94
SYPP08247 AC023141.11-201ENST00000508864 202 ntBASIC2.94□□□□□ -1.94
SYPP08247 RNA5SP380-201ENST00000517190 98 ntBASIC2.94□□□□□ -1.94
SYPP08247 SCARNA20.6-201ENST00000517251 106 ntBASIC2.94□□□□□ -1.94
SYPP08247 AC090142.3-201ENST00000519012 385 ntBASIC2.94□□□□□ -1.94
SYPP08247 AC245166.1-201ENST00000521012 253 ntBASIC2.94□□□□□ -1.94
SYPP08247 RPL23AP91-201ENST00000569211 455 ntBASIC2.94□□□□□ -1.94
SYPP08247 U6.73-201ENST00000619194 103 ntBASIC2.94□□□□□ -1.94
SYPP08247 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SYPP08247 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.93□□□□□ -1.94
SYPP08247 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.93□□□□□ -1.94
SYPP08247 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SYPP08247 AC138915.1-201ENST00000565427 1685 ntBASIC2.93□□□□□ -1.94
SYPP08247 RNU6-1080P-201ENST00000383982 107 ntBASIC2.93□□□□□ -1.94
SYPP08247 RNA5SP508-201ENST00000411327 119 ntBASIC2.93□□□□□ -1.94
SYPP08247 RPL32P35-201ENST00000415214 394 ntBASIC2.93□□□□□ -1.94
SYPP08247 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.93□□□□□ -1.94
SYPP08247 RPS29P12-201ENST00000460178 152 ntBASIC2.93□□□□□ -1.94
SYPP08247 CKS1BP2-201ENST00000497342 240 ntBASIC2.93□□□□□ -1.94
SYPP08247 SNORA4.4-201ENST00000515921 135 ntBASIC2.93□□□□□ -1.94
SYPP08247 RNA5SP217-201ENST00000515959 91 ntBASIC2.93□□□□□ -1.94
SYPP08247 RNU6-991P-201ENST00000516168 107 ntBASIC2.93□□□□□ -1.94
SYPP08247 RNA5SP153-201ENST00000516498 76 ntBASIC2.93□□□□□ -1.94
SYPP08247 AC011604.1-201ENST00000545978 196 ntBASIC2.93□□□□□ -1.94
SYPP08247 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.92□□□□□ -1.94
SYPP08247 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SYPP08247 RNU6-834P-201ENST00000362367 110 ntBASIC2.92□□□□□ -1.94
SYPP08247 RNU6-1209P-201ENST00000363655 107 ntBASIC2.92□□□□□ -1.94
SYPP08247 Y_RNA.796-201ENST00000364268 102 ntBASIC2.92□□□□□ -1.94
SYPP08247 SNORA25.7-201ENST00000364375 127 ntBASIC2.92□□□□□ -1.94
SYPP08247 Y_RNA.799-201ENST00000364992 102 ntBASIC2.92□□□□□ -1.94
SYPP08247 AL035461.1-201ENST00000421490 332 ntBASIC2.92□□□□□ -1.94
SYPP08247 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.92□□□□□ -1.94
SYPP08247 EEF1B2P7-201ENST00000451177 676 ntBASIC2.92□□□□□ -1.94
SYPP08247 AL109933.2-201ENST00000452651 260 ntBASIC2.92□□□□□ -1.94
SYPP08247 RN7SKP132-201ENST00000516001 208 ntBASIC2.92□□□□□ -1.94
SYPP08247 RNU6-919P-201ENST00000516731 104 ntBASIC2.92□□□□□ -1.94
SYPP08247 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.92□□□□□ -1.94
SYPP08247 AC097639.2-201ENST00000603159 172 ntBASIC2.92□□□□□ -1.94
SYPP08247 AC093831.2-201ENST00000624393 3427 ntBASIC2.92□□□□□ -1.94
SYPP08247 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SYPP08247 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.91□□□□□ -1.94
SYPP08247 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SYPP08247 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
SYPP08247 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.91□□□□□ -1.94
SYPP08247 FAM35CP-201ENST00000554755 2470 ntBASIC2.91□□□□□ -1.94
SYPP08247 RNU6-1325P-201ENST00000364905 105 ntBASIC2.91□□□□□ -1.94
SYPP08247 SNORA9.2-201ENST00000365361 133 ntBASIC2.91□□□□□ -1.94
SYPP08247 RNU6-44P-201ENST00000384045 107 ntBASIC2.91□□□□□ -1.94
SYPP08247 MIR196B-201ENST00000384852 84 ntBASIC2.91□□□□□ -1.94
SYPP08247 MIR562-201ENST00000384894 95 ntBASIC2.91□□□□□ -1.94
SYPP08247 RPL21P3-201ENST00000395517 478 ntBASIC2.91□□□□□ -1.94
SYPP08247 AC060773.1-201ENST00000421698 310 ntBASIC2.91□□□□□ -1.94
SYPP08247 RNU7-107P-201ENST00000459121 61 ntBASIC2.91□□□□□ -1.94
SYPP08247 RN7SL75P-201ENST00000461926 281 ntBASIC2.91□□□□□ -1.94
SYPP08247 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.91□□□□□ -1.94
SYPP08247 AC092435.3-201ENST00000565538 3654 ntBASIC2.91□□□□□ -1.94
SYPP08247 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SYPP08247 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 226.3 ms