Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 Y_RNA.592-201ENST00000410274 109 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.11□□□□□ -2.23
TRIM3O75382 MTND4P28-201ENST00000426217 387 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 CALM2P4-201ENST00000430810 426 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 DYNLT3P2-201ENST00000442517 295 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 RNU6-470P-201ENST00000515954 104 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 RNU6-1291P-201ENST00000516591 104 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 RNU2-56P-201ENST00000516826 190 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 SNORA20.3-201ENST00000516880 132 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 AC090821.2-201ENST00000523552 176 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.11□□□□□ -2.23
TRIM3O75382 AL513423.1-201ENST00000621695 132 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 AC127459.3-201ENST00000624328 466 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 MTND4LP32-201ENST00000636111 270 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 AC099654.14-201ENST00000638599 341 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRIM3O75382 MIR410-201ENST00000362222 80 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 MIR337-201ENST00000362281 93 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 MIR660-201ENST00000385235 97 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
TRIM3O75382 RBMX2P4-201ENST00000441256 376 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 AL137792.2-201ENST00000443484 235 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 PRDX4P1-201ENST00000507189 574 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 RNA5SP168-201ENST00000516642 112 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 RNU6-63P-201ENST00000516690 95 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 RNU6-922P-201ENST00000516753 99 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 AC055872.1-201ENST00000570978 278 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 MIR3684-201ENST00000579779 74 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 AL162424.1-201ENST00000602325 221 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 AC113139.1-201ENST00000605049 239 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 AC080078.3-201ENST00000605407 463 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 SNORA28-201ENST00000606769 126 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 AC122108.2-201ENST00000611946 526 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 AC004467.1-201ENST00000615678 330 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 AC068647.2-201ENST00000637380 353 ntBASIC1.1□□□□□ -2.23
TRIM3O75382 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.1□□□□□ -2.23
TRIM3O75382 SNORA1B-201ENST00000362535 133 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 Y_RNA.164-201ENST00000363709 102 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 RNU6-961P-201ENST00000363893 105 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 RNU6-505P-201ENST00000384427 107 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 U8.16-201ENST00000391279 133 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 MIR873-201ENST00000401120 77 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 Y_RNA.605-201ENST00000410577 105 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 MRPS18CP6-201ENST00000423587 223 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.09□□□□□ -2.23
TRIM3O75382 AC093850.1-201ENST00000454121 251 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 AC233266.1-201ENST00000454518 96 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 RNU6-1278P-201ENST00000516130 107 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 MIR2355-201ENST00000517199 87 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 AC091178.2-201ENST00000584401 117 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 AC242852.1-201ENST00000612151 96 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 AC244015.1-201ENST00000622301 99 ntBASIC1.09□□□□□ -2.23
TRIM3O75382 AC005592.1-201ENST00000566527 1640 ntBASIC1.08□□□□□ -2.24
TRIM3O75382 Y_RNA.142-201ENST00000363491 102 ntBASIC1.08□□□□□ -2.24
TRIM3O75382 RNU4-76P-201ENST00000364509 141 ntBASIC1.08□□□□□ -2.24
TRIM3O75382 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.08□□□□□ -2.24
TRIM3O75382 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.08□□□□□ -2.24
TRIM3O75382 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.08□□□□□ -2.24
TRIM3O75382 Y_RNA.653-201ENST00000459091 95 ntBASIC1.08□□□□□ -2.24
TRIM3O75382 RPL39P38-201ENST00000467018 153 ntBASIC1.08□□□□□ -2.24
TRIM3O75382 RNU6-341P-201ENST00000516973 96 ntBASIC1.08□□□□□ -2.24
TRIM3O75382 RNA5SP404-201ENST00000517118 132 ntBASIC1.08□□□□□ -2.24
TRIM3O75382 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.08□□□□□ -2.24
TRIM3O75382 AC005828.6-201ENST00000606610 232 ntBASIC1.08□□□□□ -2.24
TRIM3O75382 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.08□□□□□ -2.24
TRIM3O75382 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
TRIM3O75382 Y_RNA.243-201ENST00000364481 109 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 Y_RNA.314-201ENST00000365114 102 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 RNU6-117P-201ENST00000365415 107 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 RNU6-1310P-201ENST00000384153 107 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 RNU11-5P-201ENST00000391216 129 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 AC096644.2-201ENST00000429278 159 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.07□□□□□ -2.24
TRIM3O75382 OR9P1P-201ENST00000496431 281 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 RNU7-4P-201ENST00000516961 62 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 RNU6-165P-201ENST00000517170 99 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 AC144568.1-201ENST00000520139 137 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 AC011476.5-201ENST00000615594 130 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 AC091895.1-201ENST00000624494 256 ntBASIC1.07□□□□□ -2.24
TRIM3O75382 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
TRIM3O75382 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TRIM3O75382 RNU6-424P-201ENST00000384367 105 ntBASIC1.06□□□□□ -2.24
TRIM3O75382 RNU6-1297P-201ENST00000384415 104 ntBASIC1.06□□□□□ -2.24
TRIM3O75382 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
TRIM3O75382 RPEP5-201ENST00000441137 268 ntBASIC1.06□□□□□ -2.24
TRIM3O75382 HMGN1P7-201ENST00000491722 313 ntBASIC1.06□□□□□ -2.24
TRIM3O75382 AC093852.1-201ENST00000503587 266 ntBASIC1.06□□□□□ -2.24
TRIM3O75382 Y_RNA.676-201ENST00000516393 96 ntBASIC1.06□□□□□ -2.24
TRIM3O75382 AP002004.2-201ENST00000531656 154 ntBASIC1.06□□□□□ -2.24
TRIM3O75382 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.06□□□□□ -2.24
TRIM3O75382 HSPE1P19-201ENST00000603327 295 ntBASIC1.06□□□□□ -2.24
TRIM3O75382 Y_RNA.101-201ENST00000363154 102 ntBASIC1.05□□□□□ -2.24
TRIM3O75382 RNU6-1283P-201ENST00000365314 105 ntBASIC1.05□□□□□ -2.24
TRIM3O75382 SNORA70.7-201ENST00000384159 133 ntBASIC1.05□□□□□ -2.24
TRIM3O75382 RNU6-708P-201ENST00000384217 107 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms