Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC130454.1-201ENST00000622948 401 ntBASIC1.55□□□□□ -2.16
PHF1O43189 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.55□□□□□ -2.16
PHF1O43189 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
PHF1O43189 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PHF1O43189 Y_RNA.26-201ENST00000362539 101 ntBASIC1.54□□□□□ -2.16
PHF1O43189 Y_RNA.143-201ENST00000363520 106 ntBASIC1.54□□□□□ -2.16
PHF1O43189 Y_RNA.152-201ENST00000363578 100 ntBASIC1.54□□□□□ -2.16
PHF1O43189 RNU6-770P-201ENST00000363929 105 ntBASIC1.54□□□□□ -2.16
PHF1O43189 SNORD115-30-201ENST00000364117 82 ntBASIC1.54□□□□□ -2.16
PHF1O43189 Y_RNA.222-201ENST00000364264 102 ntBASIC1.54□□□□□ -2.16
PHF1O43189 RNU6-937P-201ENST00000384325 106 ntBASIC1.54□□□□□ -2.16
PHF1O43189 SNORA67.5-201ENST00000391036 107 ntBASIC1.54□□□□□ -2.16
PHF1O43189 RNA5SP465-201ENST00000391195 109 ntBASIC1.54□□□□□ -2.16
PHF1O43189 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.54□□□□□ -2.16
PHF1O43189 AC008134.1-201ENST00000420943 193 ntBASIC1.54□□□□□ -2.16
PHF1O43189 BX510359.4-201ENST00000423750 193 ntBASIC1.54□□□□□ -2.16
PHF1O43189 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.54□□□□□ -2.16
PHF1O43189 LINC01399-202ENST00000458450 244 ntBASIC1.54□□□□□ -2.16
PHF1O43189 RNU6-1143P-201ENST00000516125 104 ntBASIC1.54□□□□□ -2.16
PHF1O43189 RNU6-397P-201ENST00000516226 104 ntBASIC1.54□□□□□ -2.16
PHF1O43189 RNA5SP480-201ENST00000516840 109 ntBASIC1.54□□□□□ -2.16
PHF1O43189 MIR4303-201ENST00000581299 66 ntBASIC1.54□□□□□ -2.16
PHF1O43189 MIR8081-201ENST00000611533 95 ntBASIC1.54□□□□□ -2.16
PHF1O43189 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.54□□□□□ -2.16
PHF1O43189 AC006435.5-201ENST00000624486 112 ntBASIC1.54□□□□□ -2.16
PHF1O43189 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.54□□□□□ -2.16
PHF1O43189 U6.115-201ENST00000636045 103 ntBASIC1.54□□□□□ -2.16
PHF1O43189 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PHF1O43189 RNU6-806P-201ENST00000365147 105 ntBASIC1.53□□□□□ -2.16
PHF1O43189 RNU6-1175P-201ENST00000365200 107 ntBASIC1.53□□□□□ -2.16
PHF1O43189 RNU6-42P-201ENST00000384165 107 ntBASIC1.53□□□□□ -2.16
PHF1O43189 Y_RNA.446-201ENST00000384178 104 ntBASIC1.53□□□□□ -2.16
PHF1O43189 MIR613-201ENST00000385248 95 ntBASIC1.53□□□□□ -2.16
PHF1O43189 Y_RNA.581-201ENST00000391017 97 ntBASIC1.53□□□□□ -2.16
PHF1O43189 AL355796.1-201ENST00000406706 323 ntBASIC1.53□□□□□ -2.16
PHF1O43189 MIR1276-201ENST00000408707 83 ntBASIC1.53□□□□□ -2.16
PHF1O43189 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.53□□□□□ -2.16
PHF1O43189 MTND2P29-201ENST00000438595 412 ntBASIC1.53□□□□□ -2.16
PHF1O43189 SNORD65B-201ENST00000459126 73 ntBASIC1.53□□□□□ -2.16
PHF1O43189 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
PHF1O43189 AC011406.1-201ENST00000512440 370 ntBASIC1.53□□□□□ -2.16
PHF1O43189 RNU6-496P-201ENST00000516145 99 ntBASIC1.53□□□□□ -2.16
PHF1O43189 RNU6-107P-201ENST00000516643 102 ntBASIC1.53□□□□□ -2.16
PHF1O43189 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.53□□□□□ -2.16
PHF1O43189 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.53□□□□□ -2.16
PHF1O43189 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.53□□□□□ -2.16
PHF1O43189 MIR4419B-201ENST00000577260 68 ntBASIC1.53□□□□□ -2.16
PHF1O43189 AL512598.1-201ENST00000610158 273 ntBASIC1.53□□□□□ -2.16
PHF1O43189 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
PHF1O43189 MIR6504-201ENST00000613520 61 ntBASIC1.53□□□□□ -2.16
PHF1O43189 MIR376A1-201ENST00000616574 68 ntBASIC1.53□□□□□ -2.16
PHF1O43189 snoU2_19.2-201ENST00000363024 80 ntBASIC1.52□□□□□ -2.17
PHF1O43189 SNORD81.1-201ENST00000363064 77 ntBASIC1.52□□□□□ -2.17
PHF1O43189 RNU6-23P-201ENST00000363283 107 ntBASIC1.52□□□□□ -2.17
PHF1O43189 Y_RNA.287-201ENST00000364853 94 ntBASIC1.52□□□□□ -2.17
PHF1O43189 RNU6-1240P-201ENST00000365155 104 ntBASIC1.52□□□□□ -2.17
PHF1O43189 snosnR66.1-201ENST00000391095 99 ntBASIC1.52□□□□□ -2.17
PHF1O43189 RNA5SP475-201ENST00000410568 110 ntBASIC1.52□□□□□ -2.17
PHF1O43189 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
PHF1O43189 HMGN2P34-201ENST00000437647 269 ntBASIC1.52□□□□□ -2.17
PHF1O43189 HSPE1P21-201ENST00000438283 308 ntBASIC1.52□□□□□ -2.17
PHF1O43189 HSPE1P25-201ENST00000455484 251 ntBASIC1.52□□□□□ -2.17
PHF1O43189 MTATP8P1-201ENST00000467115 207 ntBASIC1.52□□□□□ -2.17
PHF1O43189 MTCO2P24-201ENST00000515611 426 ntBASIC1.52□□□□□ -2.17
PHF1O43189 AC005786.1-201ENST00000588553 154 ntBASIC1.52□□□□□ -2.17
PHF1O43189 AL078603.1-201ENST00000603824 313 ntBASIC1.52□□□□□ -2.17
PHF1O43189 MIR338-201ENST00000636369 67 ntBASIC1.52□□□□□ -2.17
PHF1O43189 AL391987.6-201ENST00000305671 199 ntBASIC1.51□□□□□ -2.17
PHF1O43189 Y_RNA.19-201ENST00000362462 99 ntBASIC1.51□□□□□ -2.17
PHF1O43189 snoU2-30.2-201ENST00000362805 70 ntBASIC1.51□□□□□ -2.17
PHF1O43189 Y_RNA.327-201ENST00000365201 102 ntBASIC1.51□□□□□ -2.17
PHF1O43189 SNORA20B-201ENST00000384220 132 ntBASIC1.51□□□□□ -2.17
PHF1O43189 Y_RNA.459-201ENST00000384251 102 ntBASIC1.51□□□□□ -2.17
PHF1O43189 Y_RNA.574-201ENST00000384766 95 ntBASIC1.51□□□□□ -2.17
PHF1O43189 MIR9-3-201ENST00000385084 90 ntBASIC1.51□□□□□ -2.17
PHF1O43189 RNA5SP212-201ENST00000391223 107 ntBASIC1.51□□□□□ -2.17
PHF1O43189 RPL21P38-201ENST00000418090 167 ntBASIC1.51□□□□□ -2.17
PHF1O43189 MTCYBP9-201ENST00000431021 303 ntBASIC1.51□□□□□ -2.17
PHF1O43189 MTND3P2-201ENST00000438452 342 ntBASIC1.51□□□□□ -2.17
PHF1O43189 ATP5J2P3-201ENST00000451550 258 ntBASIC1.51□□□□□ -2.17
PHF1O43189 AC005042.3-201ENST00000453230 174 ntBASIC1.51□□□□□ -2.17
PHF1O43189 RPS29P11-201ENST00000496507 171 ntBASIC1.51□□□□□ -2.17
PHF1O43189 AC010598.1-201ENST00000510378 103 ntBASIC1.51□□□□□ -2.17
PHF1O43189 SNORA40.15-201ENST00000516884 107 ntBASIC1.51□□□□□ -2.17
PHF1O43189 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.51□□□□□ -2.17
PHF1O43189 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.51□□□□□ -2.17
PHF1O43189 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.51□□□□□ -2.17
PHF1O43189 MIR3618-201ENST00000580330 88 ntBASIC1.51□□□□□ -2.17
PHF1O43189 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.51□□□□□ -2.17
PHF1O43189 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
PHF1O43189 SNORA27.1-201ENST00000362604 124 ntBASIC1.5□□□□□ -2.17
PHF1O43189 RNU6-1309P-201ENST00000363305 108 ntBASIC1.5□□□□□ -2.17
PHF1O43189 RNU1-96P-201ENST00000364163 162 ntBASIC1.5□□□□□ -2.17
PHF1O43189 Y_RNA.286-201ENST00000364813 102 ntBASIC1.5□□□□□ -2.17
PHF1O43189 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.5□□□□□ -2.17
PHF1O43189 RNU6-102P-201ENST00000384485 104 ntBASIC1.5□□□□□ -2.17
PHF1O43189 Y_RNA.540-201ENST00000384638 111 ntBASIC1.5□□□□□ -2.17
PHF1O43189 MIR568-201ENST00000385036 95 ntBASIC1.5□□□□□ -2.17
PHF1O43189 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
PHF1O43189 RNU2-61P-201ENST00000411069 191 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 213.2 ms