Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 Y_RNA.632-201ENST00000459189 102 ntBASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 RNU7-94P-201ENST00000459576 63 ntBASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 AC108729.3-201ENST00000513484 108 ntBASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 Y_RNA.702-201ENST00000516843 96 ntBASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 AL161670.1-201ENST00000554348 137 ntBASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 AP001485.1-201ENST00000604799 199 ntBASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
ATG4BQ9Y4P1 RNU6-490P-201ENST00000362985 107 ntBASIC1.32□□□□□ -2.2
ATG4BQ9Y4P1 MIR559-201ENST00000385188 96 ntBASIC1.32□□□□□ -2.2
ATG4BQ9Y4P1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.32□□□□□ -2.2
ATG4BQ9Y4P1 MTCO2P27-201ENST00000420740 428 ntBASIC1.32□□□□□ -2.2
ATG4BQ9Y4P1 AC018865.2-201ENST00000423631 129 ntBASIC1.32□□□□□ -2.2
ATG4BQ9Y4P1 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.32□□□□□ -2.2
ATG4BQ9Y4P1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.32□□□□□ -2.2
ATG4BQ9Y4P1 SNORA31.10-201ENST00000516482 106 ntBASIC1.32□□□□□ -2.2
ATG4BQ9Y4P1 RNU6-699P-201ENST00000517081 110 ntBASIC1.32□□□□□ -2.2
ATG4BQ9Y4P1 RNU7-172P-201ENST00000517125 64 ntBASIC1.32□□□□□ -2.2
ATG4BQ9Y4P1 AC093027.1-201ENST00000546698 429 ntBASIC1.32□□□□□ -2.2
ATG4BQ9Y4P1 MIR8054-201ENST00000620877 86 ntBASIC1.32□□□□□ -2.2
ATG4BQ9Y4P1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 Y_RNA.58-201ENST00000362807 102 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 Y_RNA.154-201ENST00000363624 102 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 RNU6-454P-201ENST00000364292 107 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 RNY3P1-201ENST00000365085 102 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 RNY3-201ENST00000365484 102 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 MRPL42P3-201ENST00000401492 326 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 MRPL35P1-201ENST00000404272 572 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 RN7SKP200-201ENST00000410564 320 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 RPS27P16-201ENST00000425758 201 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 AC009474.2-201ENST00000451383 136 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 RPL30P7-201ENST00000479312 323 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 AC097462.1-201ENST00000514125 324 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 RNA5SP20-201ENST00000515976 84 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 RNU1-92P-201ENST00000517017 135 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 AC023442.1-201ENST00000531247 422 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 AL442163.3-201ENST00000554110 156 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 AL160236.1-201ENST00000556317 195 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 Y_RNA.804-201ENST00000615262 101 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 AC112487.2-201ENST00000637950 304 ntBASIC1.31□□□□□ -2.2
ATG4BQ9Y4P1 RNU1-22P-201ENST00000363334 158 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 RNU6-961P-201ENST00000363893 105 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 RNU6-1040P-201ENST00000383974 107 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 RNY3P14-201ENST00000384309 102 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 RNU6-376P-201ENST00000384731 106 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 RNU6-440P-201ENST00000390882 105 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 AC099799.1-201ENST00000439809 192 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 PGBD4P5-201ENST00000445958 426 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 RPS29P23-201ENST00000458635 123 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 AL117351.2-201ENST00000513571 157 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 RPL21P9-201ENST00000556149 474 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 MIR4421-201ENST00000578133 69 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 MIR3937-201ENST00000580135 106 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 AL162424.1-201ENST00000602325 221 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 AL021879.1-201ENST00000611756 288 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 AC021506.2-201ENST00000612354 169 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 U2.1-201ENST00000618978 145 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 U6.115-201ENST00000636045 103 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 AC018630.2-201ENST00000534866 2403 ntBASIC1.3□□□□□ -2.2
ATG4BQ9Y4P1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 SNORA27.1-201ENST00000362604 124 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 Y_RNA.70-201ENST00000362886 110 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 Y_RNA.263-201ENST00000364659 114 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 RNA5SP259-201ENST00000365541 109 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 RNU6-1310P-201ENST00000384153 107 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 MIR513A1-201ENST00000385138 129 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 MTCO3P19-201ENST00000415864 321 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 FCF1P4-201ENST00000448326 183 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 SNORD19B-201ENST00000459623 84 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 AL163540.1-201ENST00000485382 386 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 FGF7P4-201ENST00000509595 295 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 Y_RNA.661-201ENST00000516003 99 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 AC040896.1-201ENST00000613819 479 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 AC011476.5-201ENST00000615594 130 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 AC004467.1-201ENST00000615678 330 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 MIR6079-201ENST00000635807 62 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms