Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 NDUFA5P6-201ENST00000542110 379 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 AC127455.1-201ENST00000565496 145 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 ZNF861P-201ENST00000588126 639 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 AL033523.1-201ENST00000605153 153 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 snoU2_19.4-201ENST00000364329 80 ntBASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 U8.7-201ENST00000364940 136 ntBASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-804P-201ENST00000384286 107 ntBASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 SNORD116-13-201ENST00000384408 92 ntBASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-578P-201ENST00000390980 103 ntBASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 SNORA36B-201ENST00000410438 131 ntBASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 AC105272.1-201ENST00000438604 198 ntBASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 RN7SL297P-201ENST00000483161 293 ntBASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-1146P-201ENST00000516282 102 ntBASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 MIR3910-1-201ENST00000580936 111 ntBASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PPARGC1AQ9UBK2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 RNY3P5-201ENST00000384127 102 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-187P-201ENST00000384139 106 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-443P-201ENST00000384780 107 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 MIR9-1-201ENST00000385198 89 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 MIR613-201ENST00000385248 95 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 AL138827.1-201ENST00000402666 306 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 RNA5SP21-201ENST00000410917 96 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 AC025750.2-201ENST00000442609 450 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 AC117454.1-201ENST00000491120 168 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 AC018868.1-201ENST00000491307 315 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-991P-201ENST00000516168 107 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 MIR4431-201ENST00000579990 94 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 MIR5194-201ENST00000582634 120 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 POLR3GP1-201ENST00000594073 261 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 AC006386.2-201ENST00000624491 75 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 AC012005.1-201ENST00000624575 75 ntBASIC2.84□□□□□ -1.95
PPARGC1AQ9UBK2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
PPARGC1AQ9UBK2 AL356292.1-201ENST00000283110 373 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 RNU6-743P-201ENST00000364151 106 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 RNU6-969P-201ENST00000383900 105 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 Y_RNA.398-201ENST00000383952 99 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 MIR592-201ENST00000384959 97 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 MIR634-201ENST00000385208 97 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 RNU6-1228P-201ENST00000391014 107 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 RNU11-5P-201ENST00000391216 129 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 AL162725.1-201ENST00000435405 301 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 AL353689.1-201ENST00000438895 199 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 RPS27P22-201ENST00000478056 241 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 AC079600.2-201ENST00000550076 130 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 MIR4658-201ENST00000584344 65 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 RPL12P50-201ENST00000603116 116 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 AC104465.1-201ENST00000611365 139 ntBASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PPARGC1AQ9UBK2 AP006437.1-201ENST00000641440 3685 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 Y_RNA.24-201ENST00000362508 103 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 Y_RNA.99-201ENST00000363138 105 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 RNU1-22P-201ENST00000363334 158 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 RNU6-674P-201ENST00000363831 107 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 RNU4-10P-201ENST00000364383 140 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 RNU6-376P-201ENST00000384731 106 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 RNU6-239P-201ENST00000390990 99 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 TMSB4XP3-201ENST00000445144 114 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 AC010409.1-201ENST00000487382 476 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 AC097462.1-201ENST00000514125 324 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 RN7SKP132-201ENST00000516001 208 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 RNU6-667P-201ENST00000517186 102 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 MIR7106-201ENST00000612419 65 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 U2.20-201ENST00000613956 192 ntBASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
PPARGC1AQ9UBK2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 MIR340-201ENST00000362125 95 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 RNU4-13P-201ENST00000364019 141 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 RNU1-112P-201ENST00000364401 164 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 RNA5SP125-201ENST00000364843 120 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 SNORA25B-201ENST00000365507 128 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 RNU6-449P-201ENST00000383914 107 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 RNA5SP496-201ENST00000391240 109 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 SEPT7P4-201ENST00000437076 306 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 RNU6-437P-201ENST00000459408 95 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 MTND5P41-201ENST00000517498 206 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 AC109810.1-201ENST00000534066 224 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 GTF3AP2-201ENST00000557014 266 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 AC015720.1-201ENST00000565251 277 ntBASIC2.81□□□□□ -1.96
PPARGC1AQ9UBK2 MIR4438-201ENST00000585271 93 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms