Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 SNORA16B-201ENST00000364674 135 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.307-201ENST00000365022 117 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.418-201ENST00000384029 102 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-418P-201ENST00000384035 107 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 SNORA67.3-201ENST00000384366 140 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-1235P-201ENST00000384559 107 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 MIR1262-201ENST00000408276 93 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 AC016909.1-201ENST00000415916 166 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 AL445646.1-201ENST00000431784 216 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 MTND2P29-201ENST00000438595 412 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-498P-201ENST00000459468 107 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 MTND1P19-201ENST00000511780 315 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-237P-201ENST00000515985 71 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.680-201ENST00000516441 93 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 snoZ196.1-201ENST00000625269 89 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
SLC52A3Q9NQ40 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.14-201ENST00000362415 103 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 SNORD114-1-201ENST00000362705 72 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.136-201ENST00000363444 102 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 Y_RNA.243-201ENST00000364481 109 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-438P-201ENST00000365561 103 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 SNORA64-201ENST00000384674 134 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 MIR17-201ENST00000385012 84 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 MT-TG-201ENST00000387429 68 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 U3.40-201ENST00000408706 208 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 RNA5SP475-201ENST00000410568 110 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 RNA5SP450-201ENST00000411206 102 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 AL357134.1-201ENST00000445848 426 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-1132P-201ENST00000459214 107 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-155P-201ENST00000516347 100 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 RNU2-34P-201ENST00000516534 121 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-856P-201ENST00000516959 98 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 DEFB108E-201ENST00000524692 240 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 AC087441.2-201ENST00000529141 262 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 DEFB122-202ENST00000569013 197 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 AC012433.1-201ENST00000588916 398 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 AC025754.2-201ENST00000606491 432 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 SDR42E1P4-201ENST00000620894 481 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 U6.115-201ENST00000636045 103 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 MIR219B-201ENST00000637023 88 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 U6.104-201ENST00000637979 90 ntBASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
SLC52A3Q9NQ40 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 RNA5SP432-201ENST00000362480 116 ntBASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 AL512604.1-201ENST00000404812 257 ntBASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 RNU6-57P-201ENST00000411348 103 ntBASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 RPL23AP36-201ENST00000413895 458 ntBASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 MRPS10P1-201ENST00000448483 130 ntBASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 AC074290.1-201ENST00000448883 135 ntBASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 AC008749.1-201ENST00000597650 306 ntBASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.84□□□□□ -2.11
SLC52A3Q9NQ40 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.84□□□□□ -2.12
SLC52A3Q9NQ40 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 AL391987.6-201ENST00000305671 199 ntBASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 RNU6-326P-201ENST00000365480 107 ntBASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.383-201ENST00000383855 97 ntBASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.447-201ENST00000384184 113 ntBASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.618-201ENST00000410949 107 ntBASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 SERF1AP1-201ENST00000514575 187 ntBASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 RNU6-436P-201ENST00000516171 114 ntBASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 RNU6-948P-201ENST00000516374 107 ntBASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 AC025647.1-201ENST00000517879 253 ntBASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 AC006006.1-201ENST00000603082 144 ntBASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 AC006001.4-201ENST00000622243 395 ntBASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
SLC52A3Q9NQ40 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 RNU1-58P-201ENST00000362413 163 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 SNORD48-201ENST00000364953 64 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.350-201ENST00000365409 98 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 RNU6-160P-201ENST00000384591 107 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 Y_RNA.569-201ENST00000384749 103 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 AL031003.1-201ENST00000404229 172 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 AL355796.1-201ENST00000406706 323 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 MIR1283-2-201ENST00000408621 87 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 MTCO1P5-201ENST00000433573 344 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 POLR2KP2-201ENST00000438155 177 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 snoU13.23-201ENST00000458863 104 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 RNA5SP233-201ENST00000459153 113 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 RPL23AP42-201ENST00000471152 471 ntBASIC1.82□□□□□ -2.12
SLC52A3Q9NQ40 RPS27P21-201ENST00000486977 252 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 256.7 ms