Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 MIR4709-201ENST00000577272 72 ntBASIC1.58□□□□□ -2.16
Q9N2K0 MIR4423-201ENST00000580922 80 ntBASIC1.58□□□□□ -2.16
Q9N2K0 AC073413.2-201ENST00000604332 360 ntBASIC1.58□□□□□ -2.16
Q9N2K0 AC022441.3-201ENST00000605737 136 ntBASIC1.58□□□□□ -2.16
Q9N2K0 AC091812.1-201ENST00000432235 1948 ntBASIC1.58□□□□□ -2.16
Q9N2K0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Q9N2K0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Q9N2K0 Y_RNA.31-201ENST00000362574 102 ntBASIC1.57□□□□□ -2.16
Q9N2K0 Y_RNA.101-201ENST00000363154 102 ntBASIC1.57□□□□□ -2.16
Q9N2K0 Y_RNA.148-201ENST00000363557 117 ntBASIC1.57□□□□□ -2.16
Q9N2K0 Y_RNA.446-201ENST00000384178 104 ntBASIC1.57□□□□□ -2.16
Q9N2K0 SNORD63-201ENST00000384262 68 ntBASIC1.57□□□□□ -2.16
Q9N2K0 Y_RNA.471-201ENST00000384312 102 ntBASIC1.57□□□□□ -2.16
Q9N2K0 Y_RNA.485-201ENST00000384395 102 ntBASIC1.57□□□□□ -2.16
Q9N2K0 Y_RNA.551-201ENST00000384661 102 ntBASIC1.57□□□□□ -2.16
Q9N2K0 AL079342.1-201ENST00000401460 267 ntBASIC1.57□□□□□ -2.16
Q9N2K0 RN7SKP200-201ENST00000410564 320 ntBASIC1.57□□□□□ -2.16
Q9N2K0 AL354751.2-201ENST00000415471 210 ntBASIC1.57□□□□□ -2.16
Q9N2K0 RPEP5-201ENST00000441137 268 ntBASIC1.57□□□□□ -2.16
Q9N2K0 RPS27P1-201ENST00000450552 247 ntBASIC1.57□□□□□ -2.16
Q9N2K0 AC005042.3-201ENST00000453230 174 ntBASIC1.57□□□□□ -2.16
Q9N2K0 snoU13.26-201ENST00000459452 105 ntBASIC1.57□□□□□ -2.16
Q9N2K0 RNU6-155P-201ENST00000516347 100 ntBASIC1.57□□□□□ -2.16
Q9N2K0 AL162424.1-201ENST00000602325 221 ntBASIC1.57□□□□□ -2.16
Q9N2K0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.57□□□□□ -2.16
Q9N2K0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Q9N2K0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.56□□□□□ -2.16
Q9N2K0 SNORA16.1-201ENST00000364597 132 ntBASIC1.56□□□□□ -2.16
Q9N2K0 RNU6-1175P-201ENST00000365200 107 ntBASIC1.56□□□□□ -2.16
Q9N2K0 RNU6-376P-201ENST00000384731 106 ntBASIC1.56□□□□□ -2.16
Q9N2K0 RNU6-308P-201ENST00000390957 107 ntBASIC1.56□□□□□ -2.16
Q9N2K0 RNA5SP109-201ENST00000391010 116 ntBASIC1.56□□□□□ -2.16
Q9N2K0 RPL21P1-201ENST00000399532 476 ntBASIC1.56□□□□□ -2.16
Q9N2K0 AL031003.1-201ENST00000404229 172 ntBASIC1.56□□□□□ -2.16
Q9N2K0 RN7SKP223-201ENST00000410582 62 ntBASIC1.56□□□□□ -2.16
Q9N2K0 RN7SKP192-201ENST00000411291 327 ntBASIC1.56□□□□□ -2.16
Q9N2K0 DPH3P2-201ENST00000422618 250 ntBASIC1.56□□□□□ -2.16
Q9N2K0 AC245047.3-201ENST00000429428 127 ntBASIC1.56□□□□□ -2.16
Q9N2K0 HMGN2P23-201ENST00000456759 269 ntBASIC1.56□□□□□ -2.16
Q9N2K0 Y_RNA.711-201ENST00000516993 102 ntBASIC1.56□□□□□ -2.16
Q9N2K0 AC055872.1-201ENST00000570978 278 ntBASIC1.56□□□□□ -2.16
Q9N2K0 AC022217.4-201ENST00000604389 163 ntBASIC1.56□□□□□ -2.16
Q9N2K0 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.56□□□□□ -2.16
Q9N2K0 AC127459.3-201ENST00000624328 466 ntBASIC1.56□□□□□ -2.16
Q9N2K0 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.56□□□□□ -2.16
Q9N2K0 MIR6079-201ENST00000635807 62 ntBASIC1.56□□□□□ -2.16
Q9N2K0 AC092881.1-201ENST00000638218 2733 ntBASIC1.56□□□□□ -2.16
Q9N2K0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.56□□□□□ -2.16
Q9N2K0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Q9N2K0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Q9N2K0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Q9N2K0 Y_RNA.394-201ENST00000383942 103 ntBASIC1.55□□□□□ -2.16
Q9N2K0 RNU6-439P-201ENST00000384188 106 ntBASIC1.55□□□□□ -2.16
Q9N2K0 MIR520G-201ENST00000385064 90 ntBASIC1.55□□□□□ -2.16
Q9N2K0 MIR934-201ENST00000401241 83 ntBASIC1.55□□□□□ -2.16
Q9N2K0 MTND1P14-201ENST00000427400 950 ntBASIC1.55□□□□□ -2.16
Q9N2K0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Q9N2K0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Q9N2K0 Y_RNA.701-201ENST00000516812 110 ntBASIC1.55□□□□□ -2.16
Q9N2K0 AC024614.2-201ENST00000577584 372 ntBASIC1.55□□□□□ -2.16
Q9N2K0 AC124312.5-201ENST00000604451 268 ntBASIC1.55□□□□□ -2.16
Q9N2K0 MIR7843-201ENST00000622274 79 ntBASIC1.55□□□□□ -2.16
Q9N2K0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
Q9N2K0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Q9N2K0 RNA5SP432-201ENST00000362480 116 ntBASIC1.54□□□□□ -2.16
Q9N2K0 Y_RNA.138-201ENST00000363462 102 ntBASIC1.54□□□□□ -2.16
Q9N2K0 RNU4-76P-201ENST00000364509 141 ntBASIC1.54□□□□□ -2.16
Q9N2K0 RNU6-117P-201ENST00000365415 107 ntBASIC1.54□□□□□ -2.16
Q9N2K0 RNU6-101P-201ENST00000410323 104 ntBASIC1.54□□□□□ -2.16
Q9N2K0 RNU6-710P-201ENST00000410424 105 ntBASIC1.54□□□□□ -2.16
Q9N2K0 snoU13.9-201ENST00000458927 103 ntBASIC1.54□□□□□ -2.16
Q9N2K0 RNU7-34P-201ENST00000459394 64 ntBASIC1.54□□□□□ -2.16
Q9N2K0 UBL5P3-201ENST00000475112 231 ntBASIC1.54□□□□□ -2.16
Q9N2K0 RNU6-341P-201ENST00000516973 96 ntBASIC1.54□□□□□ -2.16
Q9N2K0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.54□□□□□ -2.16
Q9N2K0 AC044792.1-201ENST00000593294 196 ntBASIC1.54□□□□□ -2.16
Q9N2K0 AC011373.1-201ENST00000607270 237 ntBASIC1.54□□□□□ -2.16
Q9N2K0 AC040896.1-201ENST00000613819 479 ntBASIC1.54□□□□□ -2.16
Q9N2K0 MIR8054-201ENST00000620877 86 ntBASIC1.54□□□□□ -2.16
Q9N2K0 Y_RNA.124-201ENST00000363339 93 ntBASIC1.53□□□□□ -2.16
Q9N2K0 Y_RNA.158-201ENST00000363651 101 ntBASIC1.53□□□□□ -2.16
Q9N2K0 RNU6-324P-201ENST00000363957 106 ntBASIC1.53□□□□□ -2.16
Q9N2K0 Y_RNA.202-201ENST00000364083 110 ntBASIC1.53□□□□□ -2.16
Q9N2K0 SNORA4.2-201ENST00000365313 147 ntBASIC1.53□□□□□ -2.16
Q9N2K0 Y_RNA.380-201ENST00000365663 111 ntBASIC1.53□□□□□ -2.16
Q9N2K0 SNORA22B-201ENST00000383876 138 ntBASIC1.53□□□□□ -2.16
Q9N2K0 RNU6-505P-201ENST00000384427 107 ntBASIC1.53□□□□□ -2.16
Q9N2K0 MIR504-201ENST00000385065 83 ntBASIC1.53□□□□□ -2.16
Q9N2K0 RNU6-440P-201ENST00000390882 105 ntBASIC1.53□□□□□ -2.16
Q9N2K0 AL034345.1-201ENST00000407768 123 ntBASIC1.53□□□□□ -2.16
Q9N2K0 RNU2-61P-201ENST00000411069 191 ntBASIC1.53□□□□□ -2.16
Q9N2K0 RNU6-1199P-201ENST00000411249 104 ntBASIC1.53□□□□□ -2.16
Q9N2K0 AL606517.2-201ENST00000442855 241 ntBASIC1.53□□□□□ -2.16
Q9N2K0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Q9N2K0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Q9N2K0 AC107393.1-201ENST00000512403 346 ntBASIC1.53□□□□□ -2.16
Q9N2K0 AL358944.1-201ENST00000528537 144 ntBASIC1.53□□□□□ -2.16
Q9N2K0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.53□□□□□ -2.16
Q9N2K0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.53□□□□□ -2.16
Q9N2K0 MIR4419B-201ENST00000577260 68 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 224.1 ms