Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SNORD14.1-201ENST00000365609 90 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 AC117470.1-201ENST00000381974 330 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 MIR320B2-201ENST00000408479 138 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.15□□□□□ -2.59
ABCA3Q99758 BTBD7P2-201ENST00000441962 620 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 AC010424.1-201ENST00000506336 297 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.15□□□□□ -2.59
ABCA3Q99758 RNU7-51P-201ENST00000516560 62 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 MIR548AD-201ENST00000584780 82 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 AC125232.2-201ENST00000592457 143 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 AC018462.2-201ENST00000605375 395 ntBASIC-1.15□□□□□ -2.59
ABCA3Q99758 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.16□□□□□ -2.6
ABCA3Q99758 MIR101-2-201ENST00000362195 79 ntBASIC-1.16□□□□□ -2.6
ABCA3Q99758 RNA5SP192-201ENST00000364404 120 ntBASIC-1.16□□□□□ -2.6
ABCA3Q99758 U8.5-201ENST00000364528 136 ntBASIC-1.16□□□□□ -2.6
ABCA3Q99758 RNU6-24P-201ENST00000384440 107 ntBASIC-1.16□□□□□ -2.6
ABCA3Q99758 AC109327.2-201ENST00000448339 378 ntBASIC-1.16□□□□□ -2.6
ABCA3Q99758 RNU6-344P-201ENST00000516635 111 ntBASIC-1.16□□□□□ -2.6
ABCA3Q99758 MIR548AR-201ENST00000582191 57 ntBASIC-1.16□□□□□ -2.6
ABCA3Q99758 AC091304.10-201ENST00000641554 121 ntBASIC-1.16□□□□□ -2.6
ABCA3Q99758 RNU6-462P-201ENST00000362659 105 ntBASIC-1.17□□□□□ -2.6
ABCA3Q99758 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.17□□□□□ -2.6
ABCA3Q99758 MIR516B2-201ENST00000385190 85 ntBASIC-1.17□□□□□ -2.6
ABCA3Q99758 MIR802-201ENST00000390235 94 ntBASIC-1.17□□□□□ -2.6
ABCA3Q99758 AC098592.1-201ENST00000419352 333 ntBASIC-1.17□□□□□ -2.6
ABCA3Q99758 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.17□□□□□ -2.6
ABCA3Q99758 AC137499.1-201ENST00000427602 88 ntBASIC-1.17□□□□□ -2.6
ABCA3Q99758 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.17□□□□□ -2.6
ABCA3Q99758 AL353572.1-201ENST00000442490 417 ntBASIC-1.17□□□□□ -2.6
ABCA3Q99758 RN7SKP19-201ENST00000516016 252 ntBASIC-1.17□□□□□ -2.6
ABCA3Q99758 AC105029.1-201ENST00000520250 669 ntBASIC-1.17□□□□□ -2.6
ABCA3Q99758 MTND4LP25-201ENST00000570218 163 ntBASIC-1.17□□□□□ -2.6
ABCA3Q99758 AC006435.5-201ENST00000624486 112 ntBASIC-1.17□□□□□ -2.6
ABCA3Q99758 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.17□□□□□ -2.6
ABCA3Q99758 RNU6-187P-201ENST00000384139 106 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 SNORA36A-201ENST00000384221 132 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 AC004866.1-201ENST00000411748 78 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.18□□□□□ -2.6
ABCA3Q99758 AL442067.1-201ENST00000613261 223 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 MTND4P9-201ENST00000507819 1346 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 AL355143.1-201ENST00000407101 841 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.18□□□□□ -2.6
ABCA3Q99758 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.18□□□□□ -2.6
ABCA3Q99758 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.18□□□□□ -2.6
ABCA3Q99758 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 ZNF114P1-201ENST00000453500 292 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 MIR18B-201ENST00000454574 71 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 RNU7-182P-201ENST00000459009 62 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 AC010493.1-201ENST00000513479 292 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 AC097462.1-201ENST00000514125 324 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 RNA5SP461-201ENST00000516451 104 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 RNU7-156P-201ENST00000517214 74 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 AC018448.1-201ENST00000552843 316 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 AC023158.2-201ENST00000614876 543 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 AC078880.5-201ENST00000617845 421 ntBASIC-1.18□□□□□ -2.6
ABCA3Q99758 RNU6-190P-201ENST00000384154 102 ntBASIC-1.19□□□□□ -2.6
ABCA3Q99758 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.19□□□□□ -2.6
ABCA3Q99758 AC114878.1-201ENST00000441166 358 ntBASIC-1.19□□□□□ -2.6
ABCA3Q99758 AC090572.1-201ENST00000519251 160 ntBASIC-1.19□□□□□ -2.6
ABCA3Q99758 AC016911.1-201ENST00000613297 452 ntBASIC-1.19□□□□□ -2.6
ABCA3Q99758 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
ABCA3Q99758 MIR377-201ENST00000362145 69 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 MCFD2P1-201ENST00000417812 300 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 AL158053.1-201ENST00000441503 453 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 RNU6-897P-201ENST00000517135 105 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 AL358944.1-201ENST00000528537 144 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.2□□□□□ -2.6
ABCA3Q99758 MIR7107-201ENST00000611489 80 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 MIR6828-201ENST00000636181 60 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 AL445523.1-201ENST00000451184 1362 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 RNU2-54P-201ENST00000410299 190 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 RNU6-430P-201ENST00000517078 107 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 AC107934.1-201ENST00000522215 217 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 MIR3925-201ENST00000584674 77 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 AC120024.3-201ENST00000603167 156 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 AP001836.1-201ENST00000604675 523 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 AC063944.3-201ENST00000609969 533 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 AL590491.3-201ENST00000610731 82 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 uc_338.4-201ENST00000616635 176 ntBASIC-1.2□□□□□ -2.6
ABCA3Q99758 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.21□□□□□ -2.6
ABCA3Q99758 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.21□□□□□ -2.6
ABCA3Q99758 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.21□□□□□ -2.6
ABCA3Q99758 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.21□□□□□ -2.6
ABCA3Q99758 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.21□□□□□ -2.6
ABCA3Q99758 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.21□□□□□ -2.6
ABCA3Q99758 AC008521.1-201ENST00000587471 187 ntBASIC-1.21□□□□□ -2.6
ABCA3Q99758 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.22□□□□□ -2.6
ABCA3Q99758 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.22□□□□□ -2.6
ABCA3Q99758 RNU6-873P-201ENST00000363833 107 ntBASIC-1.22□□□□□ -2.6
ABCA3Q99758 MIR563-201ENST00000385080 79 ntBASIC-1.22□□□□□ -2.6
ABCA3Q99758 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.22□□□□□ -2.6
ABCA3Q99758 MIR544B-201ENST00000582372 78 ntBASIC-1.22□□□□□ -2.6
ABCA3Q99758 MIR655-201ENST00000362159 97 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 226.5 ms