Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RNA5SP465-201ENST00000391195 109 ntBASIC2.08□□□□□ -2.08
PKP4Q99569 MIR1298-201ENST00000408783 112 ntBASIC2.08□□□□□ -2.08
PKP4Q99569 SNORA11.4-201ENST00000408823 129 ntBASIC2.08□□□□□ -2.08
PKP4Q99569 AL353689.1-201ENST00000438895 199 ntBASIC2.08□□□□□ -2.08
PKP4Q99569 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.08□□□□□ -2.08
PKP4Q99569 RNU6-182P-201ENST00000516970 105 ntBASIC2.08□□□□□ -2.08
PKP4Q99569 SNORA81.3-201ENST00000517283 198 ntBASIC2.08□□□□□ -2.08
PKP4Q99569 RPL21P9-201ENST00000556149 474 ntBASIC2.08□□□□□ -2.08
PKP4Q99569 MIR4287-201ENST00000579398 78 ntBASIC2.08□□□□□ -2.08
PKP4Q99569 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.08□□□□□ -2.08
PKP4Q99569 AL359851.1-201ENST00000569460 4997 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.82-201ENST00000363000 102 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.83-201ENST00000363005 113 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.92-201ENST00000363043 102 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.117-201ENST00000363294 101 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.122-201ENST00000363331 96 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 RNU6-1305P-201ENST00000364353 104 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.235-201ENST00000364412 102 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.274-201ENST00000364714 101 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.297-201ENST00000364950 91 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.306-201ENST00000365015 102 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.312-201ENST00000365089 102 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.322-201ENST00000365151 102 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 RNU6-1248P-201ENST00000391096 64 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 MIR548I3-201ENST00000408378 149 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 MIR548I1-201ENST00000408810 149 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.590-201ENST00000410140 107 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 RNU2-61P-201ENST00000411069 191 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 AL158823.1-201ENST00000418441 478 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 AL138752.1-201ENST00000452964 351 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 PRELID3BP1-201ENST00000457142 540 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.650-201ENST00000459002 102 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 COX6CP14-201ENST00000469580 174 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.777-201ENST00000516982 102 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 MIR4282-201ENST00000583613 67 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.771-201ENST00000598668 102 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 AC098479.1-201ENST00000609225 154 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 AL627230.6-201ENST00000611129 280 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 Y_RNA.789-201ENST00000622480 102 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PKP4Q99569 ZNF702P-202ENST00000434269 1966 ntBASIC2.07□□□□□ -2.08
PKP4Q99569 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
PKP4Q99569 AC009487.4-201ENST00000624969 3585 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
PKP4Q99569 Y_RNA.29-201ENST00000362570 113 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 RNU4-80P-201ENST00000363200 141 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 Y_RNA.199-201ENST00000364014 102 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 RNU6-234P-201ENST00000365229 104 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 RNU6-1289P-201ENST00000384431 106 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 MIR548B-201ENST00000385247 97 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 MIR300-201ENST00000401138 83 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 RN7SKP223-201ENST00000410582 62 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.06□□□□□ -2.08
PKP4Q99569 MIR449C-201ENST00000516047 92 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 RNU6-191P-201ENST00000516295 94 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 Y_RNA.679-201ENST00000516416 91 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 MIR1273D-201ENST00000577266 86 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 MIR3145-201ENST00000580727 82 ntBASIC2.06□□□□□ -2.08
PKP4Q99569 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.06□□□□□ -2.08
PKP4Q99569 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PKP4Q99569 Y_RNA.217-201ENST00000364214 105 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 Y_RNA.329-201ENST00000365209 107 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 RNU6-209P-201ENST00000384118 107 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 SNORA67.3-201ENST00000384366 140 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 SNORD14D-201ENST00000384390 87 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 SNORA64-201ENST00000384674 134 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 AL023284.1-201ENST00000403956 276 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 RNU6-651P-201ENST00000411040 105 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 PIGPP3-201ENST00000425307 415 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 AC024067.1-201ENST00000426199 223 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 RNU7-14P-201ENST00000459331 62 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 Y_RNA.641-201ENST00000459414 105 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 HMGN2P9-201ENST00000476875 229 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 RNU6-436P-201ENST00000516171 114 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.05□□□□□ -2.08
PKP4Q99569 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.05□□□□□ -2.08
PKP4Q99569 DEFB117-201ENST00000602356 141 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 CENPCP1-201ENST00000533085 2578 ntBASIC2.05□□□□□ -2.08
PKP4Q99569 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PKP4Q99569 RNU6-545P-201ENST00000362681 104 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 RNU6-324P-201ENST00000363957 106 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 SNORD115-30-201ENST00000364117 82 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 Y_RNA.243-201ENST00000364481 109 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 Y_RNA.292-201ENST00000364904 97 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 RNY4P28-201ENST00000365281 93 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 RNU6-662P-201ENST00000384253 104 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
PKP4Q99569 MIR1283-1-201ENST00000408494 87 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 Y_RNA.626-201ENST00000411288 95 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.04□□□□□ -2.08
PKP4Q99569 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PKP4Q99569 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.04□□□□□ -2.08
PKP4Q99569 AC074290.1-201ENST00000448883 135 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 SNORD2.1-201ENST00000458762 69 ntBASIC2.04□□□□□ -2.08
PKP4Q99569 Y_RNA.638-201ENST00000459374 113 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms