Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CMTM3Q96MX0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CMTM3Q96MX0 AC091812.1-201ENST00000432235 1948 ntBASIC1.66□□□□□ -2.14
CMTM3Q96MX0 AC005592.1-201ENST00000566527 1640 ntBASIC1.66□□□□□ -2.14
CMTM3Q96MX0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
CMTM3Q96MX0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
CMTM3Q96MX0 MIR449A-201ENST00000362113 91 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 RNA5SP289-201ENST00000362332 137 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.31-201ENST00000362574 102 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 RNU4-50P-201ENST00000364361 141 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.65□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.462-201ENST00000384268 102 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 RNU6-505P-201ENST00000384427 107 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.570-201ENST00000384750 101 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 RNU5A-5P-201ENST00000411054 116 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.65□□□□□ -2.15
CMTM3Q96MX0 MTND1P14-201ENST00000427400 950 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CMTM3Q96MX0 HSPE1P13-201ENST00000451143 297 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 U8.20-201ENST00000459445 131 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 AC091021.1-201ENST00000468051 388 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 AC107393.1-201ENST00000512403 346 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 SNORA25.10-201ENST00000515926 124 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 RNU6-436P-201ENST00000516171 114 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 RNU6-155P-201ENST00000516347 100 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 RNU6-341P-201ENST00000516973 96 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.713-201ENST00000517013 96 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 AC040926.1-201ENST00000530195 238 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 MIR4423-201ENST00000580922 80 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 AC091178.2-201ENST00000584401 117 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 AC021506.2-201ENST00000612354 169 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 AL590808.1-201ENST00000618696 141 ntBASIC1.65□□□□□ -2.15
CMTM3Q96MX0 MTND4P29-201ENST00000503122 1372 ntBASIC1.64□□□□□ -2.15
CMTM3Q96MX0 MIR302D-201ENST00000362275 68 ntBASIC1.64□□□□□ -2.15
CMTM3Q96MX0 MIR126-201ENST00000362291 85 ntBASIC1.64□□□□□ -2.15
CMTM3Q96MX0 RNU6-1123P-201ENST00000362347 106 ntBASIC1.64□□□□□ -2.15
CMTM3Q96MX0 RNU6-1175P-201ENST00000365200 107 ntBASIC1.64□□□□□ -2.15
CMTM3Q96MX0 RNU6-308P-201ENST00000390957 107 ntBASIC1.64□□□□□ -2.15
CMTM3Q96MX0 AL034345.1-201ENST00000407768 123 ntBASIC1.64□□□□□ -2.15
CMTM3Q96MX0 AL390729.2-201ENST00000416137 156 ntBASIC1.64□□□□□ -2.15
CMTM3Q96MX0 PMCHL1-202ENST00000423102 261 ntBASIC1.64□□□□□ -2.15
CMTM3Q96MX0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.64□□□□□ -2.15
CMTM3Q96MX0 AC015688.6-201ENST00000577737 104 ntBASIC1.64□□□□□ -2.15
CMTM3Q96MX0 MIR4422-201ENST00000581938 83 ntBASIC1.64□□□□□ -2.15
CMTM3Q96MX0 MIR8063-201ENST00000621930 81 ntBASIC1.64□□□□□ -2.15
CMTM3Q96MX0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.64□□□□□ -2.15
CMTM3Q96MX0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
CMTM3Q96MX0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.128-201ENST00000363391 112 ntBASIC1.63□□□□□ -2.15
CMTM3Q96MX0 RNU6-324P-201ENST00000363957 106 ntBASIC1.63□□□□□ -2.15
CMTM3Q96MX0 SNORA16.1-201ENST00000364597 132 ntBASIC1.63□□□□□ -2.15
CMTM3Q96MX0 SNORD1A-201ENST00000364968 72 ntBASIC1.63□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.424-201ENST00000384063 103 ntBASIC1.63□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.439-201ENST00000384119 94 ntBASIC1.63□□□□□ -2.15
CMTM3Q96MX0 RNU6-474P-201ENST00000384243 107 ntBASIC1.63□□□□□ -2.15
CMTM3Q96MX0 DPH3P2-201ENST00000422618 250 ntBASIC1.63□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.631-201ENST00000459607 101 ntBASIC1.63□□□□□ -2.15
CMTM3Q96MX0 RNU6-966P-201ENST00000516479 104 ntBASIC1.63□□□□□ -2.15
CMTM3Q96MX0 MIR4513-201ENST00000581077 86 ntBASIC1.63□□□□□ -2.15
CMTM3Q96MX0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.63□□□□□ -2.15
CMTM3Q96MX0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.63□□□□□ -2.15
CMTM3Q96MX0 SNORA28-201ENST00000606769 126 ntBASIC1.63□□□□□ -2.15
CMTM3Q96MX0 AC064859.1-201ENST00000624741 174 ntBASIC1.63□□□□□ -2.15
CMTM3Q96MX0 AC092881.1-201ENST00000638218 2733 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.28-201ENST00000362554 111 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.267-201ENST00000364679 109 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 SNORD48-201ENST00000364953 64 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 SNORD63-201ENST00000384262 68 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 Y_RNA.471-201ENST00000384312 102 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 MIR520G-201ENST00000385064 90 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 RNU2-61P-201ENST00000411069 191 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 RPL23AP36-201ENST00000413895 458 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 PGBD4P5-201ENST00000445958 426 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 AC005042.3-201ENST00000453230 174 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 RNU6-1337P-201ENST00000516525 95 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 RNU6-63P-201ENST00000516690 95 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 MIR1273D-201ENST00000577266 86 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 MIR3618-201ENST00000580330 88 ntBASIC1.62□□□□□ -2.15
CMTM3Q96MX0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.62□□□□□ -2.15
CMTM3Q96MX0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CMTM3Q96MX0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CMTM3Q96MX0 SNORD33-201ENST00000362761 85 ntBASIC1.61□□□□□ -2.15
CMTM3Q96MX0 RNU6-136P-201ENST00000384663 107 ntBASIC1.61□□□□□ -2.15
CMTM3Q96MX0 SNORA12.1-201ENST00000390873 148 ntBASIC1.61□□□□□ -2.15
CMTM3Q96MX0 RNU2-20P-201ENST00000410425 191 ntBASIC1.61□□□□□ -2.15
CMTM3Q96MX0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.61□□□□□ -2.15
CMTM3Q96MX0 OOSP1P1-201ENST00000423265 274 ntBASIC1.61□□□□□ -2.15
CMTM3Q96MX0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.61□□□□□ -2.15
CMTM3Q96MX0 RPEP5-201ENST00000441137 268 ntBASIC1.61□□□□□ -2.15
CMTM3Q96MX0 AC245517.4-201ENST00000448601 281 ntBASIC1.61□□□□□ -2.15
CMTM3Q96MX0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.61□□□□□ -2.15
CMTM3Q96MX0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.61□□□□□ -2.15
CMTM3Q96MX0 RNU7-28P-201ENST00000516759 62 ntBASIC1.61□□□□□ -2.15
CMTM3Q96MX0 AP002004.2-201ENST00000531656 154 ntBASIC1.61□□□□□ -2.15
CMTM3Q96MX0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.61□□□□□ -2.15
CMTM3Q96MX0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.61□□□□□ -2.15
CMTM3Q96MX0 AC011373.1-201ENST00000607270 237 ntBASIC1.61□□□□□ -2.15
CMTM3Q96MX0 AL021879.1-201ENST00000611756 288 ntBASIC1.61□□□□□ -2.15
CMTM3Q96MX0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms