Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL355796.1-201ENST00000406706 323 ntBASIC2.2□□□□□ -2.06
ZNF549Q6P9A3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.2□□□□□ -2.06
ZNF549Q6P9A3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF549Q6P9A3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.2□□□□□ -2.06
ZNF549Q6P9A3 AC018630.3-201ENST00000542637 96 ntBASIC2.2□□□□□ -2.06
ZNF549Q6P9A3 AC108706.1-201ENST00000611053 297 ntBASIC2.2□□□□□ -2.06
ZNF549Q6P9A3 AC009831.4-201ENST00000620744 325 ntBASIC2.2□□□□□ -2.06
ZNF549Q6P9A3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.7-201ENST00000362352 102 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.124-201ENST00000363339 93 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 RNA5SP393-201ENST00000363423 117 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 snoU2_19.4-201ENST00000364329 80 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 RNU6-234P-201ENST00000365229 104 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 MIR1283-1-201ENST00000408494 87 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 RNU2-2P-201ENST00000410396 191 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 AL445687.1-201ENST00000439946 251 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 RNU5F-4P-201ENST00000516581 114 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 AC090616.3-201ENST00000582184 217 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 MIR3117-201ENST00000584034 78 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 AL670379.2-201ENST00000604983 252 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 RNU2-4P-201ENST00000606190 192 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 U2.15-201ENST00000611544 191 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 U2.16-201ENST00000613119 191 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 U2.12-201ENST00000613778 191 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 U2.9-201ENST00000615427 191 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 U2.11-201ENST00000616345 191 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 U2.2-201ENST00000616535 191 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 U2.3-201ENST00000617785 191 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 U2.19-201ENST00000618602 191 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 RNU2-1-201ENST00000618664 191 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 U2.6-201ENST00000619225 191 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 U2.5-201ENST00000619465 191 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 U2.10-201ENST00000620268 191 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 AC090517.3-201ENST00000625170 141 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 AC134026.1-201ENST00000623249 2239 ntBASIC2.19□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.75-201ENST00000362927 97 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 RNU4-10P-201ENST00000364383 140 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 RNU6-1130P-201ENST00000365434 107 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 RNU4-17P-201ENST00000365598 141 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.456-201ENST00000384232 111 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 RNU6-301P-201ENST00000384277 107 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.572-201ENST00000384757 98 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.580-201ENST00000391004 95 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 MTCO2P33-201ENST00000402100 465 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 RNU6-710P-201ENST00000410424 105 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 SUMO1P4-201ENST00000429430 302 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 RNU7-14P-201ENST00000459331 62 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 AC090515.1-201ENST00000465295 476 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 AC025754.2-201ENST00000606491 432 ntBASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ZNF549Q6P9A3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.8-201ENST00000362353 102 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 SNORD114-7-201ENST00000362520 77 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.121-201ENST00000363309 113 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.272-201ENST00000364696 102 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 RNA5SP126-201ENST00000365092 109 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 RNU6-975P-201ENST00000384296 105 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 MIR626-201ENST00000385032 94 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 AL355497.1-201ENST00000406262 551 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 MIR1294-201ENST00000408503 142 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 U6atac.2-201ENST00000408644 118 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 RNU6-855P-201ENST00000410395 104 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 RPL23AP7-203ENST00000449021 469 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 AL356280.1-201ENST00000603614 379 ntBASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.17□□□□□ -2.06
ZNF549Q6P9A3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.23-201ENST00000362496 106 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 RNU6-312P-201ENST00000364629 107 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 Y_RNA.341-201ENST00000365341 102 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 SNORD50.2-201ENST00000365465 70 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 SNORA20B-201ENST00000384220 132 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 MIR95-201ENST00000385072 81 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 MIR300-201ENST00000401138 83 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 AL121890.1-201ENST00000435457 205 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 AC016925.1-201ENST00000458303 298 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 RNU7-141P-201ENST00000459304 62 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 RNU7-57P-201ENST00000459540 60 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 RNU6-221P-201ENST00000459541 99 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 SCARNA8-201ENST00000515924 131 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 SCARNA3-201ENST00000517097 143 ntBASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.16□□□□□ -2.06
ZNF549Q6P9A3 MIR1248-201ENST00000629190 106 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms