Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RPS29P13-201ENST00000402041 169 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 AL136310.1-201ENST00000404926 654 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 AC106883.1-201ENST00000418805 562 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.22□□□□□ -2.44
ABCA4P78363 MTATP6P17-201ENST00000431030 672 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 AC087499.4-201ENST00000448505 178 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 snoU13.16-201ENST00000459350 104 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.22□□□□□ -2.44
ABCA4P78363 AC068587.5-201ENST00000528506 175 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 MIR4264-201ENST00000583520 66 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 AP002360.4-201ENST00000606980 481 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 AL136370.1-201ENST00000608166 691 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.22□□□□□ -2.44
ABCA4P78363 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.22□□□□□ -2.44
ABCA4P78363 MTND4P4-201ENST00000439033 1366 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 RNU6-679P-201ENST00000391003 106 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 SNORD83.1-201ENST00000411362 77 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 FCF1P9-201ENST00000412546 282 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 MTATP6P14-201ENST00000455189 673 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 RNU7-185P-201ENST00000459215 60 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 RPL23AP75-201ENST00000491601 451 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 SNORA31.10-201ENST00000516482 106 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 SNORA74.3-201ENST00000517108 154 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 AC123904.2-201ENST00000548059 300 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 MIR5706-201ENST00000579841 80 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 MIR4639-201ENST00000584938 69 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 AC011458.1-201ENST00000604034 617 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 AC091304.9-201ENST00000612091 226 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 AC134878.1-201ENST00000619901 243 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 AC010608.3-201ENST00000625048 527 ntBASIC-0.22□□□□□ -2.45
ABCA4P78363 MIR1-1-201ENST00000362147 71 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 SNORD56.2-201ENST00000363242 71 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 SNORD114-12-201ENST00000365400 75 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 SNORA24-201ENST00000384096 131 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 MIR454-201ENST00000390180 115 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 SNORA3B-201ENST00000391305 131 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.23□□□□□ -2.45
ABCA4P78363 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.23□□□□□ -2.45
ABCA4P78363 SNRPGP14-201ENST00000435400 219 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 EPS15P1-201ENST00000448836 336 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 AL031274.1-201ENST00000450334 232 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.23□□□□□ -2.45
ABCA4P78363 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.23□□□□□ -2.45
ABCA4P78363 SNORD18.2-201ENST00000459604 70 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.23□□□□□ -2.45
ABCA4P78363 AC114755.3-201ENST00000481111 251 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 AC105029.1-201ENST00000520250 669 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 AC131281.1-201ENST00000522984 164 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.23□□□□□ -2.45
ABCA4P78363 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.23□□□□□ -2.45
ABCA4P78363 AC246785.4-201ENST00000605374 287 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 MIR7107-201ENST00000611489 80 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 AC006157.1-201ENST00000611750 366 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 AC010205.1-201ENST00000616668 449 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 AC015726.2-201ENST00000620112 122 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 MIR4251-201ENST00000635819 61 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 MIR499B-201ENST00000636498 73 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 AC068137.4-201ENST00000638485 296 ntBASIC-0.23□□□□□ -2.45
ABCA4P78363 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 RNU6-702P-201ENST00000364982 107 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 RNU6-61P-201ENST00000365528 109 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 RNU6-455P-201ENST00000384681 107 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 RNU6-284P-201ENST00000411105 106 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 AC079354.2-201ENST00000453523 154 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 MTND3P25-201ENST00000509243 135 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 SNORD22.1-201ENST00000516331 125 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.24□□□□□ -2.45
ABCA4P78363 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.24□□□□□ -2.45
ABCA4P78363 AP003733.2-201ENST00000529409 171 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 MIR4743-201ENST00000584576 69 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 RN7SL660P-201ENST00000614852 299 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 MIR6079-201ENST00000635807 62 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 RNU6-336P-201ENST00000364891 107 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 RNU6-47P-201ENST00000383866 107 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 RNU6-431P-201ENST00000383874 107 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 SNORD28-201ENST00000384706 75 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 SNORD115.1-201ENST00000391109 76 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.24□□□□□ -2.45
ABCA4P78363 RNU7-73P-201ENST00000458743 63 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 RNU7-62P-201ENST00000458856 62 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.24□□□□□ -2.45
ABCA4P78363 RNU7-99P-201ENST00000516271 62 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 RNU7-128P-201ENST00000517247 62 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 AP001836.1-201ENST00000604675 523 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 AC016597.2-201ENST00000613256 341 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 U4.1-201ENST00000620349 87 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 AC019226.2-201ENST00000625973 424 ntBASIC-0.24□□□□□ -2.45
ABCA4P78363 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.25□□□□□ -2.45
ABCA4P78363 RNU6-727P-201ENST00000363592 107 ntBASIC-0.25□□□□□ -2.45
ABCA4P78363 SNORD115-30-201ENST00000364117 82 ntBASIC-0.25□□□□□ -2.45
ABCA4P78363 RNU4-36P-201ENST00000364294 144 ntBASIC-0.25□□□□□ -2.45
ABCA4P78363 RNU6-769P-201ENST00000384407 104 ntBASIC-0.25□□□□□ -2.45
ABCA4P78363 MIR516B2-201ENST00000385190 85 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 711.3 ms