Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 SNORA18.4-201ENST00000516440 124 ntBASIC3.4□□□□□ -1.87
GRIK1P39086 RNA5SP153-201ENST00000516498 76 ntBASIC3.4□□□□□ -1.87
GRIK1P39086 RNA5SP281-201ENST00000516504 135 ntBASIC3.4□□□□□ -1.87
GRIK1P39086 Y_RNA.685-201ENST00000516532 108 ntBASIC3.4□□□□□ -1.87
GRIK1P39086 RNU1-104P-201ENST00000517280 175 ntBASIC3.4□□□□□ -1.87
GRIK1P39086 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
GRIK1P39086 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
GRIK1P39086 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.4□□□□□ -1.87
GRIK1P39086 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.4□□□□□ -1.87
GRIK1P39086 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
GRIK1P39086 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
GRIK1P39086 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GRIK1P39086 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
GRIK1P39086 snoU2_19.1-201ENST00000362361 80 ntBASIC3.39□□□□□ -1.87
GRIK1P39086 RNY1P10-201ENST00000363268 113 ntBASIC3.39□□□□□ -1.87
GRIK1P39086 RNU6-972P-201ENST00000391208 107 ntBASIC3.39□□□□□ -1.87
GRIK1P39086 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.39□□□□□ -1.87
GRIK1P39086 RN7SL442P-201ENST00000473804 320 ntBASIC3.39□□□□□ -1.87
GRIK1P39086 HMGN2P9-201ENST00000476875 229 ntBASIC3.39□□□□□ -1.87
GRIK1P39086 AC021205.2-201ENST00000480069 347 ntBASIC3.39□□□□□ -1.87
GRIK1P39086 RNU6-970P-201ENST00000516312 107 ntBASIC3.39□□□□□ -1.87
GRIK1P39086 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
GRIK1P39086 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.39□□□□□ -1.87
GRIK1P39086 RPL23AP91-201ENST00000569211 455 ntBASIC3.39□□□□□ -1.87
GRIK1P39086 MIR2682-201ENST00000580305 110 ntBASIC3.39□□□□□ -1.87
GRIK1P39086 uc_338.4-201ENST00000616635 176 ntBASIC3.39□□□□□ -1.87
GRIK1P39086 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GRIK1P39086 AP003122.5-201ENST00000527668 3766 ntBASIC3.39□□□□□ -1.87
GRIK1P39086 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GRIK1P39086 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
GRIK1P39086 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
GRIK1P39086 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GRIK1P39086 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GRIK1P39086 Y_RNA.366-201ENST00000365540 102 ntBASIC3.38□□□□□ -1.87
GRIK1P39086 RNU6-1083P-201ENST00000384022 107 ntBASIC3.38□□□□□ -1.87
GRIK1P39086 SNORA1-201ENST00000384107 130 ntBASIC3.38□□□□□ -1.87
GRIK1P39086 RNU6-1152P-201ENST00000384576 107 ntBASIC3.38□□□□□ -1.87
GRIK1P39086 RNA5SP229-201ENST00000410809 99 ntBASIC3.38□□□□□ -1.87
GRIK1P39086 AC109327.2-201ENST00000448339 378 ntBASIC3.38□□□□□ -1.87
GRIK1P39086 RPS29P12-201ENST00000460178 152 ntBASIC3.38□□□□□ -1.87
GRIK1P39086 RNU7-116P-201ENST00000516940 62 ntBASIC3.38□□□□□ -1.87
GRIK1P39086 AC105245.1-201ENST00000581934 244 ntBASIC3.38□□□□□ -1.87
GRIK1P39086 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.38□□□□□ -1.87
GRIK1P39086 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
GRIK1P39086 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.38□□□□□ -1.87
GRIK1P39086 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.37□□□□□ -1.87
GRIK1P39086 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GRIK1P39086 SNORA51.4-201ENST00000364993 124 ntBASIC3.37□□□□□ -1.87
GRIK1P39086 Y_RNA.323-201ENST00000365157 109 ntBASIC3.37□□□□□ -1.87
GRIK1P39086 MIR624-201ENST00000385217 97 ntBASIC3.37□□□□□ -1.87
GRIK1P39086 RNA5SP127-201ENST00000411051 133 ntBASIC3.37□□□□□ -1.87
GRIK1P39086 AF228730.3-201ENST00000436691 102 ntBASIC3.37□□□□□ -1.87
GRIK1P39086 SNORD11-201ENST00000459124 84 ntBASIC3.37□□□□□ -1.87
GRIK1P39086 SNORD65B-201ENST00000459126 73 ntBASIC3.37□□□□□ -1.87
GRIK1P39086 RPL36AP48-201ENST00000485521 314 ntBASIC3.37□□□□□ -1.87
GRIK1P39086 AC006445.1-201ENST00000491925 405 ntBASIC3.37□□□□□ -1.87
GRIK1P39086 RNU6-65P-201ENST00000516332 98 ntBASIC3.37□□□□□ -1.87
GRIK1P39086 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.37□□□□□ -1.87
GRIK1P39086 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.37□□□□□ -1.87
GRIK1P39086 AC079598.5-201ENST00000547460 117 ntBASIC3.37□□□□□ -1.87
GRIK1P39086 AC015720.1-201ENST00000565251 277 ntBASIC3.37□□□□□ -1.87
GRIK1P39086 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.37□□□□□ -1.87
GRIK1P39086 RNU6-94P-201ENST00000607728 107 ntBASIC3.37□□□□□ -1.87
GRIK1P39086 SNORD114-7-201ENST00000362520 77 ntBASIC3.36□□□□□ -1.87
GRIK1P39086 RNU6-228P-201ENST00000362700 106 ntBASIC3.36□□□□□ -1.87
GRIK1P39086 Y_RNA.486-201ENST00000384398 107 ntBASIC3.36□□□□□ -1.87
GRIK1P39086 MIR586-201ENST00000385035 97 ntBASIC3.36□□□□□ -1.87
GRIK1P39086 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
GRIK1P39086 AC008134.1-201ENST00000420943 193 ntBASIC3.36□□□□□ -1.87
GRIK1P39086 AL353705.1-201ENST00000433468 480 ntBASIC3.36□□□□□ -1.87
GRIK1P39086 snoU13.14-201ENST00000459372 104 ntBASIC3.36□□□□□ -1.87
GRIK1P39086 RPL36AP21-201ENST00000490372 323 ntBASIC3.36□□□□□ -1.87
GRIK1P39086 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.36□□□□□ -1.87
GRIK1P39086 SCARNA11.3-201ENST00000517276 130 ntBASIC3.36□□□□□ -1.87
GRIK1P39086 MIR3129-201ENST00000581095 76 ntBASIC3.36□□□□□ -1.87
GRIK1P39086 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.36□□□□□ -1.87
GRIK1P39086 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.36□□□□□ -1.87
GRIK1P39086 uc_338.25-201ENST00000613756 156 ntBASIC3.36□□□□□ -1.87
GRIK1P39086 AL162274.2-201ENST00000614406 332 ntBASIC3.36□□□□□ -1.87
GRIK1P39086 AC134878.1-201ENST00000619901 243 ntBASIC3.36□□□□□ -1.87
GRIK1P39086 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
GRIK1P39086 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
GRIK1P39086 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
GRIK1P39086 Y_RNA.66-201ENST00000362862 102 ntBASIC3.35□□□□□ -1.87
GRIK1P39086 Y_RNA.220-201ENST00000364244 109 ntBASIC3.35□□□□□ -1.87
GRIK1P39086 Y_RNA.544-201ENST00000384650 113 ntBASIC3.35□□□□□ -1.87
GRIK1P39086 MIR450A2-201ENST00000385022 100 ntBASIC3.35□□□□□ -1.87
GRIK1P39086 SEM1P1-201ENST00000506694 209 ntBASIC3.35□□□□□ -1.87
GRIK1P39086 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.35□□□□□ -1.87
GRIK1P39086 RNU6-1098P-201ENST00000516772 96 ntBASIC3.35□□□□□ -1.87
GRIK1P39086 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.35□□□□□ -1.87
GRIK1P39086 MIR4325-201ENST00000583049 90 ntBASIC3.35□□□□□ -1.87
GRIK1P39086 UBL5P2-201ENST00000583788 219 ntBASIC3.35□□□□□ -1.87
GRIK1P39086 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.35□□□□□ -1.87
GRIK1P39086 MALAT1.1-201ENST00000618249 95 ntBASIC3.35□□□□□ -1.87
GRIK1P39086 AC025521.1-201ENST00000621624 286 ntBASIC3.35□□□□□ -1.87
GRIK1P39086 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.35□□□□□ -1.87
GRIK1P39086 AC002064.3-201ENST00000623448 346 ntBASIC3.35□□□□□ -1.87
GRIK1P39086 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GRIK1P39086 AC092435.3-201ENST00000565538 3654 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms