Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SCN4AP35499 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SCN4AP35499 RNA5SP347-201ENST00000362445 119 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RNU6-1188P-201ENST00000363795 107 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 SNORA25.8-201ENST00000364831 128 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RNU6-338P-201ENST00000383888 105 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RNU6-950P-201ENST00000384651 107 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RNU6-1148P-201ENST00000410992 104 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 AL139396.1-201ENST00000421137 167 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 AL589823.1-201ENST00000429577 183 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RAB11AP2-201ENST00000545905 639 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.87□□□□□ -2.27
SCN4AP35499 AC005668.1-201ENST00000571142 476 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 AC113139.1-201ENST00000605049 239 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 AL359075.3-201ENST00000613288 217 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 MIR2909-201ENST00000617113 69 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 Y_RNA.146-201ENST00000363549 102 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RNU6-454P-201ENST00000364292 107 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RNU4-9P-201ENST00000364951 139 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RNU6-95P-201ENST00000384697 107 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 MIR515-2-201ENST00000384883 83 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 MIR515-1-201ENST00000384884 83 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 MIR548B-201ENST00000385247 97 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 MT-TL1-201ENST00000386347 75 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RNU6-440P-201ENST00000390882 105 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RNA5SP323-201ENST00000391094 133 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 SNORD115-47-201ENST00000391226 86 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.87□□□□□ -2.27
SCN4AP35499 AC009161.1-201ENST00000417306 376 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 AL049830.1-201ENST00000468034 425 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RPL30P7-201ENST00000479312 323 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 HMGN1P12-201ENST00000499125 195 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RNU6-1278P-201ENST00000516130 107 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RNA5SP481-201ENST00000516814 122 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 RNA5SP404-201ENST00000517118 132 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.87□□□□□ -2.27
SCN4AP35499 MIR4742-201ENST00000581069 85 ntBASIC0.87□□□□□ -2.27
SCN4AP35499 Y_RNA.473-201ENST00000384333 102 ntBASIC0.86□□□□□ -2.27
SCN4AP35499 Y_RNA.573-201ENST00000384763 105 ntBASIC0.86□□□□□ -2.27
SCN4AP35499 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
SCN4AP35499 Y_RNA.619-201ENST00000410951 90 ntBASIC0.86□□□□□ -2.27
SCN4AP35499 RPS3AP52-201ENST00000435639 297 ntBASIC0.86□□□□□ -2.27
SCN4AP35499 snoU13.9-201ENST00000458927 103 ntBASIC0.86□□□□□ -2.27
SCN4AP35499 RPS26P55-201ENST00000471178 356 ntBASIC0.86□□□□□ -2.27
SCN4AP35499 RNU7-99P-201ENST00000516271 62 ntBASIC0.86□□□□□ -2.27
SCN4AP35499 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.86□□□□□ -2.27
SCN4AP35499 AL929325.1-201ENST00000603096 117 ntBASIC0.86□□□□□ -2.27
SCN4AP35499 AC080078.2-201ENST00000603766 501 ntBASIC0.86□□□□□ -2.27
SCN4AP35499 AC092794.1-201ENST00000612734 582 ntBASIC0.86□□□□□ -2.27
SCN4AP35499 PISRT1.1-201ENST00000616930 107 ntBASIC0.86□□□□□ -2.27
SCN4AP35499 MIR3688-2-201ENST00000636963 87 ntBASIC0.86□□□□□ -2.27
SCN4AP35499 MIR410-201ENST00000362222 80 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 RNU6-601P-201ENST00000384540 107 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 Y_RNA.577-201ENST00000384794 101 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
SCN4AP35499 AC245047.3-201ENST00000429428 127 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 RPL23AP50-201ENST00000434149 455 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 RPS27P22-201ENST00000478056 241 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 RNA5SP20-201ENST00000515976 84 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.85□□□□□ -2.27
SCN4AP35499 MIR4709-201ENST00000577272 72 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.85□□□□□ -2.27
SCN4AP35499 AC022217.4-201ENST00000604389 163 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 AC006001.4-201ENST00000622243 395 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SCN4AP35499 Y_RNA.67-201ENST00000362870 100 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 RNU6-331P-201ENST00000384724 107 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 AC092628.1-201ENST00000436250 252 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.85□□□□□ -2.27
SCN4AP35499 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.85□□□□□ -2.27
SCN4AP35499 AC116353.2-201ENST00000505332 712 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.85□□□□□ -2.27
SCN4AP35499 RNU6-833P-201ENST00000363486 107 ntBASIC0.84□□□□□ -2.28
SCN4AP35499 SNORA22-201ENST00000383907 134 ntBASIC0.84□□□□□ -2.28
SCN4AP35499 SNORA22C-201ENST00000384614 134 ntBASIC0.84□□□□□ -2.28
SCN4AP35499 MIR562-201ENST00000384894 95 ntBASIC0.84□□□□□ -2.28
SCN4AP35499 MTND3P10-201ENST00000450967 341 ntBASIC0.84□□□□□ -2.28
SCN4AP35499 HMGN2P26-201ENST00000463169 339 ntBASIC0.84□□□□□ -2.28
SCN4AP35499 SNORD116-28-201ENST00000516123 91 ntBASIC0.84□□□□□ -2.28
SCN4AP35499 RNU6-496P-201ENST00000516145 99 ntBASIC0.84□□□□□ -2.28
SCN4AP35499 Y_RNA.683-201ENST00000516508 93 ntBASIC0.84□□□□□ -2.28
SCN4AP35499 RNU6-229P-201ENST00000516614 102 ntBASIC0.84□□□□□ -2.28
SCN4AP35499 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.84□□□□□ -2.28
SCN4AP35499 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.84□□□□□ -2.28
SCN4AP35499 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.84□□□□□ -2.28
SCN4AP35499 GHRLOS.1-201ENST00000610995 70 ntBASIC0.84□□□□□ -2.28
SCN4AP35499 MIR653-201ENST00000385279 96 ntBASIC0.83□□□□□ -2.28
SCN4AP35499 AL355796.1-201ENST00000406706 323 ntBASIC0.83□□□□□ -2.28
SCN4AP35499 RNU6-1050P-201ENST00000410388 107 ntBASIC0.83□□□□□ -2.28
SCN4AP35499 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.83□□□□□ -2.28
SCN4AP35499 USP9YP16-201ENST00000430287 407 ntBASIC0.83□□□□□ -2.28
SCN4AP35499 FGF7P6-202ENST00000451282 293 ntBASIC0.83□□□□□ -2.28
SCN4AP35499 USP9YP23-201ENST00000455085 407 ntBASIC0.83□□□□□ -2.28
SCN4AP35499 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
SCN4AP35499 AC046134.1-201ENST00000514454 666 ntBASIC0.83□□□□□ -2.28
SCN4AP35499 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
SCN4AP35499 AC091144.1-201ENST00000519573 138 ntBASIC0.83□□□□□ -2.28
SCN4AP35499 AK6P2-201ENST00000549020 471 ntBASIC0.83□□□□□ -2.28
SCN4AP35499 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.83□□□□□ -2.28
SCN4AP35499 AC098679.4-201ENST00000624241 654 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms