Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 SNORD116-6-201ENST00000384711 96 ntBASIC0.68□□□□□ -2.3
THRAP10827 DLGAP5P1-201ENST00000430307 464 ntBASIC0.68□□□□□ -2.3
THRAP10827 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.68□□□□□ -2.3
THRAP10827 MRPS10P1-201ENST00000448483 130 ntBASIC0.68□□□□□ -2.3
THRAP10827 SNORD124-201ENST00000459577 104 ntBASIC0.68□□□□□ -2.3
THRAP10827 RPS27P22-201ENST00000478056 241 ntBASIC0.68□□□□□ -2.3
THRAP10827 AC010598.1-201ENST00000510378 103 ntBASIC0.68□□□□□ -2.3
THRAP10827 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.68□□□□□ -2.3
THRAP10827 ACA59.1-201ENST00000515966 143 ntBASIC0.68□□□□□ -2.3
THRAP10827 RNU6-947P-201ENST00000516264 106 ntBASIC0.68□□□□□ -2.3
THRAP10827 RNU7-28P-201ENST00000516759 62 ntBASIC0.68□□□□□ -2.3
THRAP10827 AL590705.4-201ENST00000532209 134 ntBASIC0.68□□□□□ -2.3
THRAP10827 AL121579.1-201ENST00000555129 305 ntBASIC0.68□□□□□ -2.3
THRAP10827 AC125232.2-201ENST00000592457 143 ntBASIC0.68□□□□□ -2.3
THRAP10827 AC068790.6-201ENST00000602558 258 ntBASIC0.68□□□□□ -2.3
THRAP10827 7SK.7-201ENST00000603504 247 ntBASIC0.68□□□□□ -2.3
THRAP10827 AC019193.3-201ENST00000609144 554 ntBASIC0.68□□□□□ -2.3
THRAP10827 AL357075.2-201ENST00000614906 189 ntBASIC0.68□□□□□ -2.3
THRAP10827 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
THRAP10827 RNU6-874P-201ENST00000362390 105 ntBASIC0.67□□□□□ -2.3
THRAP10827 Y_RNA.124-201ENST00000363339 93 ntBASIC0.67□□□□□ -2.3
THRAP10827 Y_RNA.179-201ENST00000363844 90 ntBASIC0.67□□□□□ -2.3
THRAP10827 RNU4-24P-201ENST00000364565 139 ntBASIC0.67□□□□□ -2.3
THRAP10827 Y_RNA.265-201ENST00000364677 108 ntBASIC0.67□□□□□ -2.3
THRAP10827 Y_RNA.393-201ENST00000383936 102 ntBASIC0.67□□□□□ -2.3
THRAP10827 MIR329-1-201ENST00000385028 80 ntBASIC0.67□□□□□ -2.3
THRAP10827 U8.16-201ENST00000391279 133 ntBASIC0.67□□□□□ -2.3
THRAP10827 EIF1P2-201ENST00000428233 350 ntBASIC0.67□□□□□ -2.3
THRAP10827 CALM2P4-201ENST00000430810 426 ntBASIC0.67□□□□□ -2.3
THRAP10827 MTND3P23-201ENST00000431980 347 ntBASIC0.67□□□□□ -2.3
THRAP10827 MTND3P21-201ENST00000433774 331 ntBASIC0.67□□□□□ -2.3
THRAP10827 MTND1P17-201ENST00000448961 204 ntBASIC0.67□□□□□ -2.3
THRAP10827 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.67□□□□□ -2.3
THRAP10827 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.67□□□□□ -2.3
THRAP10827 SNORD5.1-201ENST00000458800 75 ntBASIC0.67□□□□□ -2.3
THRAP10827 AC010469.2-201ENST00000496412 480 ntBASIC0.67□□□□□ -2.3
THRAP10827 RNU6-506P-201ENST00000516553 94 ntBASIC0.67□□□□□ -2.3
THRAP10827 AC136628.3-201ENST00000521868 290 ntBASIC0.67□□□□□ -2.3
THRAP10827 AC023157.2-201ENST00000540596 141 ntBASIC0.67□□□□□ -2.3
THRAP10827 AC024909.2-201ENST00000553035 286 ntBASIC0.67□□□□□ -2.3
THRAP10827 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.67□□□□□ -2.3
THRAP10827 AC011712.1-201ENST00000588959 234 ntBASIC0.67□□□□□ -2.3
THRAP10827 MIR6513-201ENST00000621188 64 ntBASIC0.67□□□□□ -2.3
THRAP10827 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.67□□□□□ -2.3
THRAP10827 MIR6079-201ENST00000635807 62 ntBASIC0.67□□□□□ -2.3
THRAP10827 RNU6-222P-201ENST00000362438 107 ntBASIC0.66□□□□□ -2.3
THRAP10827 Y_RNA.36-201ENST00000362602 112 ntBASIC0.66□□□□□ -2.3
THRAP10827 RNY4P14-201ENST00000363656 96 ntBASIC0.66□□□□□ -2.3
THRAP10827 RNU6-117P-201ENST00000365415 107 ntBASIC0.66□□□□□ -2.3
THRAP10827 RNU6-969P-201ENST00000383900 105 ntBASIC0.66□□□□□ -2.3
THRAP10827 SNORA20B-201ENST00000384220 132 ntBASIC0.66□□□□□ -2.3
THRAP10827 Y_RNA.559-201ENST00000384686 107 ntBASIC0.66□□□□□ -2.3
THRAP10827 RNU5A-5P-201ENST00000411054 116 ntBASIC0.66□□□□□ -2.3
THRAP10827 MTCO3P19-201ENST00000415864 321 ntBASIC0.66□□□□□ -2.3
THRAP10827 USP9YP30-201ENST00000430729 455 ntBASIC0.66□□□□□ -2.3
THRAP10827 Z83846.1-201ENST00000446798 265 ntBASIC0.66□□□□□ -2.3
THRAP10827 AC117454.1-201ENST00000491120 168 ntBASIC0.66□□□□□ -2.3
THRAP10827 AC022493.2-201ENST00000506122 481 ntBASIC0.66□□□□□ -2.3
THRAP10827 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.66□□□□□ -2.3
THRAP10827 AC097462.1-201ENST00000514125 324 ntBASIC0.66□□□□□ -2.3
THRAP10827 RNU6-1314P-201ENST00000517139 104 ntBASIC0.66□□□□□ -2.3
THRAP10827 AC134698.4-201ENST00000523451 826 ntBASIC0.66□□□□□ -2.3
THRAP10827 AL590095.2-201ENST00000604136 117 ntBASIC0.66□□□□□ -2.3
THRAP10827 PRELID3BP2-201ENST00000605362 201 ntBASIC0.66□□□□□ -2.3
THRAP10827 AC005828.6-201ENST00000606610 232 ntBASIC0.66□□□□□ -2.3
THRAP10827 AC010999.1-201ENST00000611856 324 ntBASIC0.66□□□□□ -2.3
THRAP10827 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
THRAP10827 MIR410-201ENST00000362222 80 ntBASIC0.65□□□□□ -2.31
THRAP10827 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
THRAP10827 RNU6-1145P-201ENST00000384246 107 ntBASIC0.65□□□□□ -2.31
THRAP10827 MIR608-201ENST00000384820 100 ntBASIC0.65□□□□□ -2.31
THRAP10827 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.65□□□□□ -2.31
THRAP10827 Z98949.2-201ENST00000440996 144 ntBASIC0.65□□□□□ -2.31
THRAP10827 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.65□□□□□ -2.31
THRAP10827 AC090142.3-201ENST00000519012 385 ntBASIC0.65□□□□□ -2.31
THRAP10827 AC004812.1-201ENST00000540773 146 ntBASIC0.65□□□□□ -2.31
THRAP10827 RPL21P9-201ENST00000556149 474 ntBASIC0.65□□□□□ -2.31
THRAP10827 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.65□□□□□ -2.31
THRAP10827 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.65□□□□□ -2.31
THRAP10827 AC048344.4-201ENST00000619744 527 ntBASIC0.65□□□□□ -2.31
THRAP10827 ZNF299P-201ENST00000406845 1804 ntBASIC0.65□□□□□ -2.31
THRAP10827 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
THRAP10827 AC005592.1-201ENST00000566527 1640 ntBASIC0.64□□□□□ -2.31
THRAP10827 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
THRAP10827 Y_RNA.48-201ENST00000362710 103 ntBASIC0.64□□□□□ -2.31
THRAP10827 Y_RNA.106-201ENST00000363189 100 ntBASIC0.64□□□□□ -2.31
THRAP10827 RNU6-454P-201ENST00000364292 107 ntBASIC0.64□□□□□ -2.31
THRAP10827 Y_RNA.517-201ENST00000384551 106 ntBASIC0.64□□□□□ -2.31
THRAP10827 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.64□□□□□ -2.31
THRAP10827 AC093850.1-201ENST00000454121 251 ntBASIC0.64□□□□□ -2.31
THRAP10827 U8.22-201ENST00000459141 133 ntBASIC0.64□□□□□ -2.31
THRAP10827 AL049830.1-201ENST00000468034 425 ntBASIC0.64□□□□□ -2.31
THRAP10827 AC091021.1-201ENST00000468051 388 ntBASIC0.64□□□□□ -2.31
THRAP10827 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.64□□□□□ -2.31
THRAP10827 AC046134.1-201ENST00000514454 666 ntBASIC0.64□□□□□ -2.31
THRAP10827 RNU6-1114P-201ENST00000516022 107 ntBASIC0.64□□□□□ -2.31
THRAP10827 RNU6-197P-201ENST00000516680 100 ntBASIC0.64□□□□□ -2.31
THRAP10827 RNU6-566P-201ENST00000516790 107 ntBASIC0.64□□□□□ -2.31
THRAP10827 RNU2-56P-201ENST00000516826 190 ntBASIC0.64□□□□□ -2.31
THRAP10827 RNU7-172P-201ENST00000517125 64 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 269.6 ms