Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL353997.1-201ENST00000432936 108 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 AL359672.1-201ENST00000442302 409 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.39□□□□□ -2.47
CXCL1P09341 snoU13.21-201ENST00000459368 105 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.39□□□□□ -2.47
CXCL1P09341 AC116353.2-201ENST00000505332 712 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 AC092436.3-201ENST00000511788 257 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 AC091144.1-201ENST00000519573 138 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 AC090897.1-201ENST00000580909 226 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 AC012433.1-201ENST00000588916 398 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 AC018645.2-201ENST00000609151 472 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 AL158209.2-201ENST00000619266 216 ntBASIC-0.39□□□□□ -2.47
CXCL1P09341 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.4□□□□□ -2.47
CXCL1P09341 MIR214-201ENST00000385214 110 ntBASIC-0.4□□□□□ -2.47
CXCL1P09341 RPL17P19-201ENST00000489069 552 ntBASIC-0.4□□□□□ -2.47
CXCL1P09341 AC018710.1-201ENST00000506509 158 ntBASIC-0.4□□□□□ -2.47
CXCL1P09341 MIR4771-2-201ENST00000577758 74 ntBASIC-0.4□□□□□ -2.47
CXCL1P09341 MIR4509-3-201ENST00000578671 94 ntBASIC-0.4□□□□□ -2.47
CXCL1P09341 MIR4771-1-201ENST00000582617 74 ntBASIC-0.4□□□□□ -2.47
CXCL1P09341 MIR4509-2-201ENST00000583920 94 ntBASIC-0.4□□□□□ -2.47
CXCL1P09341 MIR4509-1-201ENST00000618224 94 ntBASIC-0.4□□□□□ -2.47
CXCL1P09341 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.4□□□□□ -2.47
CXCL1P09341 SNORD45.3-201ENST00000363836 72 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 RNU4-9P-201ENST00000364951 139 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 RNU6-407P-201ENST00000365280 104 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 MIR153-2-201ENST00000385225 87 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 RNU6-127P-201ENST00000390897 107 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 RNU6-159P-201ENST00000391080 106 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 PCNPP3-201ENST00000393579 471 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 MIR892B-201ENST00000401279 77 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.41□□□□□ -2.48
CXCL1P09341 AL356010.1-201ENST00000456364 102 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 MTCO3P38-201ENST00000468910 766 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.41□□□□□ -2.48
CXCL1P09341 PIGPP4-201ENST00000584447 307 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 AL357075.2-201ENST00000614906 189 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 MIR6755-201ENST00000619993 66 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 AC127459.3-201ENST00000624328 466 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 AC007671.2-201ENST00000637344 619 ntBASIC-0.41□□□□□ -2.48
CXCL1P09341 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 RNU6-517P-201ENST00000384362 110 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 MIR938-201ENST00000401216 83 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 AL353572.1-201ENST00000442490 417 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 AC005042.3-201ENST00000453230 174 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 RNU7-180P-201ENST00000459240 63 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.42□□□□□ -2.48
CXCL1P09341 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.42□□□□□ -2.48
CXCL1P09341 MIR5583-1-201ENST00000580941 59 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 AC010525.2-201ENST00000590920 195 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 AC020891.4-201ENST00000605745 93 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 AL591926.4-201ENST00000616895 298 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 AC067863.3-201ENST00000624172 122 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 AC009161.2-201ENST00000624626 138 ntBASIC-0.42□□□□□ -2.48
CXCL1P09341 SNORA36.1-201ENST00000363424 132 ntBASIC-0.43□□□□□ -2.48
CXCL1P09341 SNORA72.1-201ENST00000363485 129 ntBASIC-0.43□□□□□ -2.48
CXCL1P09341 MIR521-1-201ENST00000384902 87 ntBASIC-0.43□□□□□ -2.48
CXCL1P09341 RNU6-325P-201ENST00000411132 105 ntBASIC-0.43□□□□□ -2.48
CXCL1P09341 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.43□□□□□ -2.48
CXCL1P09341 ZNF114P1-201ENST00000453500 292 ntBASIC-0.43□□□□□ -2.48
CXCL1P09341 RN7SKP287-201ENST00000516546 266 ntBASIC-0.43□□□□□ -2.48
CXCL1P09341 AC104576.1-201ENST00000524225 88 ntBASIC-0.43□□□□□ -2.48
CXCL1P09341 AP002963.1-201ENST00000530590 184 ntBASIC-0.43□□□□□ -2.48
CXCL1P09341 AC245014.2-201ENST00000603689 287 ntBASIC-0.43□□□□□ -2.48
CXCL1P09341 AC246785.4-201ENST00000605374 287 ntBASIC-0.43□□□□□ -2.48
CXCL1P09341 AP000240.1-201ENST00000609910 452 ntBASIC-0.43□□□□□ -2.48
CXCL1P09341 RNA5SP128-201ENST00000365305 116 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 RNU6-925P-201ENST00000384629 104 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 RNU2-54P-201ENST00000410299 190 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 RNU6-195P-201ENST00000411352 109 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 MLLT10P1-201ENST00000418346 262 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.44□□□□□ -2.48
CXCL1P09341 HMGN2P32-201ENST00000444648 269 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 MTCO1P29-201ENST00000496868 288 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 RNU6-63P-201ENST00000516690 95 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 AL157687.1-201ENST00000554853 619 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 MIR4264-201ENST00000583520 66 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.44□□□□□ -2.48
CXCL1P09341 AP000753.3-201ENST00000604083 169 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 HULC.1-201ENST00000612720 240 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 AL158063.1-201ENST00000615349 536 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 MIR2909-201ENST00000617113 69 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.44□□□□□ -2.48
CXCL1P09341 AC121333.1-201ENST00000567488 2709 ntBASIC-0.44□□□□□ -2.48
CXCL1P09341 SNORD50.1-201ENST00000362987 71 ntBASIC-0.45□□□□□ -2.48
CXCL1P09341 RNA5SP325-201ENST00000363756 130 ntBASIC-0.45□□□□□ -2.48
CXCL1P09341 MIR593-201ENST00000384856 100 ntBASIC-0.45□□□□□ -2.48
CXCL1P09341 MIR873-201ENST00000401120 77 ntBASIC-0.45□□□□□ -2.48
CXCL1P09341 MIR548H2-201ENST00000408874 88 ntBASIC-0.45□□□□□ -2.48
CXCL1P09341 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.45□□□□□ -2.48
CXCL1P09341 AC079354.2-201ENST00000453523 154 ntBASIC-0.45□□□□□ -2.48
CXCL1P09341 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.45□□□□□ -2.48
CXCL1P09341 RNA5SP330-201ENST00000517096 96 ntBASIC-0.45□□□□□ -2.48
CXCL1P09341 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.45□□□□□ -2.48
CXCL1P09341 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 199.6 ms