Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.02□□□□□ -1.93
SYPP08247 RNA5SP490-201ENST00000517141 136 ntBASIC3.02□□□□□ -1.93
SYPP08247 PRELID2P1-201ENST00000552837 301 ntBASIC3.02□□□□□ -1.93
SYPP08247 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.02□□□□□ -1.93
SYPP08247 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.02□□□□□ -1.93
SYPP08247 MIR4435-1-201ENST00000582552 80 ntBASIC3.02□□□□□ -1.93
SYPP08247 AL031274.2-201ENST00000599419 203 ntBASIC3.02□□□□□ -1.93
SYPP08247 AC103988.1-201ENST00000566382 2177 ntBASIC3.02□□□□□ -1.93
SYPP08247 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
SYPP08247 RNU1-22P-201ENST00000363334 158 ntBASIC3.01□□□□□ -1.93
SYPP08247 RNU4-13P-201ENST00000364019 141 ntBASIC3.01□□□□□ -1.93
SYPP08247 RNU6-1180P-201ENST00000364935 107 ntBASIC3.01□□□□□ -1.93
SYPP08247 Y_RNA.353-201ENST00000365440 108 ntBASIC3.01□□□□□ -1.93
SYPP08247 SNORA72-201ENST00000384339 132 ntBASIC3.01□□□□□ -1.93
SYPP08247 SNORD20-201ENST00000384550 80 ntBASIC3.01□□□□□ -1.93
SYPP08247 RNU2-32P-201ENST00000411193 191 ntBASIC3.01□□□□□ -1.93
SYPP08247 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.01□□□□□ -1.93
SYPP08247 AC105272.1-201ENST00000438604 198 ntBASIC3.01□□□□□ -1.93
SYPP08247 MTCO1P44-201ENST00000441935 243 ntBASIC3.01□□□□□ -1.93
SYPP08247 SEM1P1-201ENST00000506694 209 ntBASIC3.01□□□□□ -1.93
SYPP08247 SCGB1D5P-201ENST00000515134 247 ntBASIC3.01□□□□□ -1.93
SYPP08247 MIR378D2-201ENST00000580636 98 ntBASIC3.01□□□□□ -1.93
SYPP08247 AL359881.1-201ENST00000602916 267 ntBASIC3.01□□□□□ -1.93
SYPP08247 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.01□□□□□ -1.93
SYPP08247 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SYPP08247 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.01□□□□□ -1.93
SYPP08247 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
SYPP08247 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3□□□□□ -1.93
SYPP08247 SNORA68.1-201ENST00000364537 132 ntBASIC3□□□□□ -1.93
SYPP08247 RNU6-215P-201ENST00000365169 102 ntBASIC3□□□□□ -1.93
SYPP08247 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3□□□□□ -1.93
SYPP08247 RNU6-484P-201ENST00000384016 107 ntBASIC3□□□□□ -1.93
SYPP08247 MIR95-201ENST00000385072 81 ntBASIC3□□□□□ -1.93
SYPP08247 SNORA79-201ENST00000408376 140 ntBASIC3□□□□□ -1.93
SYPP08247 RNU2-55P-201ENST00000411146 174 ntBASIC3□□□□□ -1.93
SYPP08247 AC006483.1-201ENST00000487308 313 ntBASIC3□□□□□ -1.93
SYPP08247 AP001328.1-201ENST00000528550 176 ntBASIC3□□□□□ -1.93
SYPP08247 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3□□□□□ -1.93
SYPP08247 AC120024.3-201ENST00000603167 156 ntBASIC3□□□□□ -1.93
SYPP08247 AC107294.3-201ENST00000609211 526 ntBASIC3□□□□□ -1.93
SYPP08247 AC011603.4-201ENST00000611325 277 ntBASIC3□□□□□ -1.93
SYPP08247 MIR5739-201ENST00000619803 80 ntBASIC3□□□□□ -1.93
SYPP08247 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3□□□□□ -1.93
SYPP08247 AC080128.1-201ENST00000474389 1917 ntBASIC2.99□□□□□ -1.93
SYPP08247 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.99□□□□□ -1.93
SYPP08247 RNU6-1082P-201ENST00000364574 107 ntBASIC2.99□□□□□ -1.93
SYPP08247 DYNLT3P1-201ENST00000378574 347 ntBASIC2.99□□□□□ -1.93
SYPP08247 SNORD67-201ENST00000390833 111 ntBASIC2.99□□□□□ -1.93
SYPP08247 AL135938.1-201ENST00000443141 297 ntBASIC2.99□□□□□ -1.93
SYPP08247 AL357134.1-201ENST00000445848 426 ntBASIC2.99□□□□□ -1.93
SYPP08247 AC080013.2-201ENST00000460866 323 ntBASIC2.99□□□□□ -1.93
SYPP08247 RNU4-57P-201ENST00000515980 135 ntBASIC2.99□□□□□ -1.93
SYPP08247 RNU6-197P-201ENST00000516680 100 ntBASIC2.99□□□□□ -1.93
SYPP08247 MIR3945-201ENST00000581853 98 ntBASIC2.99□□□□□ -1.93
SYPP08247 AL929325.1-201ENST00000603096 117 ntBASIC2.99□□□□□ -1.93
SYPP08247 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SYPP08247 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SYPP08247 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SYPP08247 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SYPP08247 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.98□□□□□ -1.93
SYPP08247 RNU6-136P-201ENST00000384663 107 ntBASIC2.98□□□□□ -1.93
SYPP08247 FO393413.1-201ENST00000402892 195 ntBASIC2.98□□□□□ -1.93
SYPP08247 AL161788.1-201ENST00000441805 169 ntBASIC2.98□□□□□ -1.93
SYPP08247 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.98□□□□□ -1.93
SYPP08247 RPS4XP11-201ENST00000446897 772 ntBASIC2.98□□□□□ -1.93
SYPP08247 AC245102.2-201ENST00000448956 180 ntBASIC2.98□□□□□ -1.93
SYPP08247 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.98□□□□□ -1.93
SYPP08247 AC097462.1-201ENST00000514125 324 ntBASIC2.98□□□□□ -1.93
SYPP08247 Y_RNA.686-201ENST00000516548 134 ntBASIC2.98□□□□□ -1.93
SYPP08247 RNU2-56P-201ENST00000516826 190 ntBASIC2.98□□□□□ -1.93
SYPP08247 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.98□□□□□ -1.93
SYPP08247 AL160236.1-201ENST00000556317 195 ntBASIC2.98□□□□□ -1.93
SYPP08247 MIR4319-201ENST00000577285 85 ntBASIC2.98□□□□□ -1.93
SYPP08247 MIR4438-201ENST00000585271 93 ntBASIC2.98□□□□□ -1.93
SYPP08247 AL049861.1-201ENST00000603130 150 ntBASIC2.98□□□□□ -1.93
SYPP08247 U7.2-201ENST00000607576 63 ntBASIC2.98□□□□□ -1.93
SYPP08247 AC073476.4-201ENST00000628409 72 ntBASIC2.98□□□□□ -1.93
SYPP08247 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.98□□□□□ -1.93
SYPP08247 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
SYPP08247 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SYPP08247 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SYPP08247 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SYPP08247 RNU1-23P-201ENST00000363361 144 ntBASIC2.97□□□□□ -1.93
SYPP08247 Y_RNA.332-201ENST00000365271 113 ntBASIC2.97□□□□□ -1.93
SYPP08247 Y_RNA.432-201ENST00000384087 111 ntBASIC2.97□□□□□ -1.93
SYPP08247 CYCSP49-201ENST00000420810 319 ntBASIC2.97□□□□□ -1.93
SYPP08247 AC093259.1-201ENST00000509755 300 ntBASIC2.97□□□□□ -1.93
SYPP08247 MIR3117-201ENST00000584034 78 ntBASIC2.97□□□□□ -1.93
SYPP08247 MAPK10-266ENST00000641066 6555 ntBASIC2.97□□□□□ -1.93
SYPP08247 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SYPP08247 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.97□□□□□ -1.93
SYPP08247 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
SYPP08247 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.96□□□□□ -1.94
SYPP08247 Y_RNA.203-201ENST00000364106 102 ntBASIC2.96□□□□□ -1.94
SYPP08247 RNU6-743P-201ENST00000364151 106 ntBASIC2.96□□□□□ -1.94
SYPP08247 RNU6-978P-201ENST00000364371 103 ntBASIC2.96□□□□□ -1.94
SYPP08247 AC123900.1-201ENST00000420390 96 ntBASIC2.96□□□□□ -1.94
SYPP08247 AC063976.3-201ENST00000426849 329 ntBASIC2.96□□□□□ -1.94
SYPP08247 AC245047.4-201ENST00000433189 144 ntBASIC2.96□□□□□ -1.94
SYPP08247 CYP2C59P-201ENST00000457790 269 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 205.6 ms