Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.1□□□□□ -2.23
MSH4O15457 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.1□□□□□ -2.23
MSH4O15457 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
MSH4O15457 AC046134.1-201ENST00000514454 666 ntBASIC1.1□□□□□ -2.23
MSH4O15457 MIR5701-3-201ENST00000578890 82 ntBASIC1.1□□□□□ -2.23
MSH4O15457 MIR3664-201ENST00000579074 99 ntBASIC1.1□□□□□ -2.23
MSH4O15457 MIR5701-1-201ENST00000585138 82 ntBASIC1.1□□□□□ -2.23
MSH4O15457 AC125232.2-201ENST00000592457 143 ntBASIC1.1□□□□□ -2.23
MSH4O15457 MIR5701-2-201ENST00000615634 82 ntBASIC1.1□□□□□ -2.23
MSH4O15457 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.1□□□□□ -2.23
MSH4O15457 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
MSH4O15457 AC018630.2-201ENST00000534866 2403 ntBASIC1.09□□□□□ -2.23
MSH4O15457 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
MSH4O15457 RNU6-874P-201ENST00000362390 105 ntBASIC1.09□□□□□ -2.23
MSH4O15457 SNORA25.8-201ENST00000364831 128 ntBASIC1.09□□□□□ -2.23
MSH4O15457 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
MSH4O15457 SNORA12.1-201ENST00000390873 148 ntBASIC1.09□□□□□ -2.23
MSH4O15457 SNORA75.4-201ENST00000391278 119 ntBASIC1.09□□□□□ -2.23
MSH4O15457 EIF1P2-201ENST00000428233 350 ntBASIC1.09□□□□□ -2.23
MSH4O15457 RPL23AP50-201ENST00000434149 455 ntBASIC1.09□□□□□ -2.23
MSH4O15457 RBMX2P4-201ENST00000441256 376 ntBASIC1.09□□□□□ -2.23
MSH4O15457 SCARNA16.2-201ENST00000516520 172 ntBASIC1.09□□□□□ -2.23
MSH4O15457 Y_RNA.708-201ENST00000516950 96 ntBASIC1.09□□□□□ -2.23
MSH4O15457 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.09□□□□□ -2.23
MSH4O15457 SNORA4-201ENST00000584302 138 ntBASIC1.09□□□□□ -2.23
MSH4O15457 AC073349.3-201ENST00000617616 186 ntBASIC1.09□□□□□ -2.23
MSH4O15457 MIR7111-201ENST00000619751 72 ntBASIC1.09□□□□□ -2.23
MSH4O15457 SNORD3E-202ENST00000627253 216 ntBASIC1.09□□□□□ -2.23
MSH4O15457 TPTEP1-208ENST00000636884 213 ntBASIC1.09□□□□□ -2.23
MSH4O15457 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.09□□□□□ -2.23
MSH4O15457 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
MSH4O15457 RNY1P16-201ENST00000363063 111 ntBASIC1.08□□□□□ -2.24
MSH4O15457 Y_RNA.118-201ENST00000363300 101 ntBASIC1.08□□□□□ -2.24
MSH4O15457 Y_RNA.122-201ENST00000363331 96 ntBASIC1.08□□□□□ -2.24
MSH4O15457 Y_RNA.796-201ENST00000364268 102 ntBASIC1.08□□□□□ -2.24
MSH4O15457 Y_RNA.799-201ENST00000364992 102 ntBASIC1.08□□□□□ -2.24
MSH4O15457 RNU6-1283P-201ENST00000365314 105 ntBASIC1.08□□□□□ -2.24
MSH4O15457 RNU6-1264P-201ENST00000383891 107 ntBASIC1.08□□□□□ -2.24
MSH4O15457 Y_RNA.482-201ENST00000384377 111 ntBASIC1.08□□□□□ -2.24
MSH4O15457 MIR520E-201ENST00000384867 87 ntBASIC1.08□□□□□ -2.24
MSH4O15457 MIR329-1-201ENST00000385028 80 ntBASIC1.08□□□□□ -2.24
MSH4O15457 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
MSH4O15457 AC138393.2-201ENST00000414742 246 ntBASIC1.08□□□□□ -2.24
MSH4O15457 STAG3L5P-204ENST00000443759 179 ntBASIC1.08□□□□□ -2.24
MSH4O15457 U8.22-201ENST00000459141 133 ntBASIC1.08□□□□□ -2.24
MSH4O15457 RPL39P38-201ENST00000467018 153 ntBASIC1.08□□□□□ -2.24
MSH4O15457 AL162424.1-201ENST00000602325 221 ntBASIC1.08□□□□□ -2.24
MSH4O15457 MIR1244-1-201ENST00000612829 85 ntBASIC1.08□□□□□ -2.24
MSH4O15457 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.08□□□□□ -2.24
MSH4O15457 PISRT1.1-201ENST00000616930 107 ntBASIC1.08□□□□□ -2.24
MSH4O15457 AL513423.1-201ENST00000621695 132 ntBASIC1.08□□□□□ -2.24
MSH4O15457 MIR1244-3-201ENST00000635744 85 ntBASIC1.08□□□□□ -2.24
MSH4O15457 MIR1244-2-201ENST00000636449 85 ntBASIC1.08□□□□□ -2.24
MSH4O15457 AC099654.5-201ENST00000636479 350 ntBASIC1.08□□□□□ -2.24
MSH4O15457 MIR1244-4-202ENST00000636813 85 ntBASIC1.08□□□□□ -2.24
MSH4O15457 RNU6-879P-201ENST00000364328 108 ntBASIC1.07□□□□□ -2.24
MSH4O15457 RNU6-593P-201ENST00000364716 112 ntBASIC1.07□□□□□ -2.24
MSH4O15457 Y_RNA.364-201ENST00000365532 101 ntBASIC1.07□□□□□ -2.24
MSH4O15457 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
MSH4O15457 SNORA20B-201ENST00000384220 132 ntBASIC1.07□□□□□ -2.24
MSH4O15457 RNY1P14-201ENST00000384426 108 ntBASIC1.07□□□□□ -2.24
MSH4O15457 RNU6-370P-201ENST00000411008 104 ntBASIC1.07□□□□□ -2.24
MSH4O15457 AC092423.1-201ENST00000430165 186 ntBASIC1.07□□□□□ -2.24
MSH4O15457 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.07□□□□□ -2.24
MSH4O15457 AC092991.1-201ENST00000477176 376 ntBASIC1.07□□□□□ -2.24
MSH4O15457 AL133373.1-201ENST00000497098 94 ntBASIC1.07□□□□□ -2.24
MSH4O15457 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.07□□□□□ -2.24
MSH4O15457 AC097462.1-201ENST00000514125 324 ntBASIC1.07□□□□□ -2.24
MSH4O15457 RNU7-172P-201ENST00000517125 64 ntBASIC1.07□□□□□ -2.24
MSH4O15457 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.07□□□□□ -2.24
MSH4O15457 CYCSP23-201ENST00000519781 313 ntBASIC1.07□□□□□ -2.24
MSH4O15457 FAM106DP-201ENST00000586416 501 ntBASIC1.07□□□□□ -2.24
MSH4O15457 AC022306.2-201ENST00000617563 647 ntBASIC1.07□□□□□ -2.24
MSH4O15457 AC106754.2-201ENST00000623006 233 ntBASIC1.07□□□□□ -2.24
MSH4O15457 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.07□□□□□ -2.24
MSH4O15457 MIR6079-201ENST00000635807 62 ntBASIC1.07□□□□□ -2.24
MSH4O15457 AL669831.3-213ENST00000636676 183 ntBASIC1.07□□□□□ -2.24
MSH4O15457 AC068647.2-201ENST00000637380 353 ntBASIC1.07□□□□□ -2.24
MSH4O15457 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
MSH4O15457 AC073544.1-201ENST00000600110 1595 ntBASIC1.06□□□□□ -2.24
MSH4O15457 MIR373-201ENST00000362273 69 ntBASIC1.06□□□□□ -2.24
MSH4O15457 RNU6-99P-201ENST00000364721 107 ntBASIC1.06□□□□□ -2.24
MSH4O15457 Y_RNA.358-201ENST00000365491 99 ntBASIC1.06□□□□□ -2.24
MSH4O15457 MIR660-201ENST00000385235 97 ntBASIC1.06□□□□□ -2.24
MSH4O15457 AL355796.1-201ENST00000406706 323 ntBASIC1.06□□□□□ -2.24
MSH4O15457 ELOCP21-201ENST00000412558 336 ntBASIC1.06□□□□□ -2.24
MSH4O15457 MTCO3P19-201ENST00000415864 321 ntBASIC1.06□□□□□ -2.24
MSH4O15457 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
MSH4O15457 MTCYBP10-201ENST00000424905 650 ntBASIC1.06□□□□□ -2.24
MSH4O15457 RPS29P1-201ENST00000465274 159 ntBASIC1.06□□□□□ -2.24
MSH4O15457 PRDX4P1-201ENST00000507189 574 ntBASIC1.06□□□□□ -2.24
MSH4O15457 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.06□□□□□ -2.24
MSH4O15457 RNU6-113P-201ENST00000516653 101 ntBASIC1.06□□□□□ -2.24
MSH4O15457 SNORA20.3-201ENST00000516880 132 ntBASIC1.06□□□□□ -2.24
MSH4O15457 AC105029.1-201ENST00000520250 669 ntBASIC1.06□□□□□ -2.24
MSH4O15457 AC005730.3-201ENST00000583067 366 ntBASIC1.06□□□□□ -2.24
MSH4O15457 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
MSH4O15457 SNORA28-201ENST00000606769 126 ntBASIC1.06□□□□□ -2.24
MSH4O15457 AL355073.2-201ENST00000612106 557 ntBASIC1.06□□□□□ -2.24
MSH4O15457 AL357075.2-201ENST00000614906 189 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 243.6 ms