Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 AC091178.2-201ENST00000584401 117 ntBASIC2.66□□□□□ -1.98
TRBV23-1A0A0A0MS06 AL391903.3-201ENST00000612158 163 ntBASIC2.66□□□□□ -1.98
TRBV23-1A0A0A0MS06 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.66□□□□□ -1.98
TRBV23-1A0A0A0MS06 ZNF271P-202ENST00000465539 1970 ntBASIC2.66□□□□□ -1.98
TRBV23-1A0A0A0MS06 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRBV23-1A0A0A0MS06 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
TRBV23-1A0A0A0MS06 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.66□□□□□ -1.98
TRBV23-1A0A0A0MS06 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.66□□□□□ -1.98
TRBV23-1A0A0A0MS06 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.65□□□□□ -1.98
TRBV23-1A0A0A0MS06 Y_RNA.203-201ENST00000364106 102 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNU4-41P-201ENST00000364426 143 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 Y_RNA.464-201ENST00000384282 110 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 AL512604.1-201ENST00000404812 257 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 Y_RNA.621-201ENST00000411065 96 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 RPL32P35-201ENST00000415214 394 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 AC233266.1-201ENST00000454518 96 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 AC245047.8-201ENST00000456455 284 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 RPS27AP9-201ENST00000477681 438 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNU6-1007P-201ENST00000516586 107 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNU6-341P-201ENST00000516973 96 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 MRPS18CP4-201ENST00000535821 231 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 MIR2682-201ENST00000580305 110 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 MIR2681-201ENST00000581814 105 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 YPEL5P2-201ENST00000605553 359 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 AC242852.1-201ENST00000612151 96 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 uc_338.25-201ENST00000613756 156 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 AC244015.1-201ENST00000622301 99 ntBASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
TRBV23-1A0A0A0MS06 AC108206.1-201ENST00000570186 4159 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 Y_RNA.75-201ENST00000362927 97 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 Y_RNA.412-201ENST00000384001 104 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNU1-52P-201ENST00000384190 164 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 MIR181B1-201ENST00000385240 110 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNA5SP496-201ENST00000391240 109 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 MIR1283-2-201ENST00000408621 87 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 HMGN2P35-201ENST00000412164 270 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 RN7SL863P-201ENST00000462370 296 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 SCARNA8-201ENST00000515924 131 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNA5SP217-201ENST00000515959 91 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 SNORA74D-201ENST00000516404 141 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNU6-1291P-201ENST00000516591 104 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 RN7SKP57-201ENST00000517248 293 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 MIR5004-201ENST00000579078 107 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 MIR3651-201ENST00000630427 90 ntBASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRBV23-1A0A0A0MS06 AL365361.1-201ENST00000566942 3481 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNU6-312P-201ENST00000364629 107 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 Y_RNA.267-201ENST00000364679 109 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 SNORA9-201ENST00000384215 133 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 SNORA7.4-201ENST00000384249 137 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNU6-578P-201ENST00000390980 103 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 HMGN2P3-201ENST00000433603 273 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 HMGN2P5-201ENST00000436882 273 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 TRBV12-1-201ENST00000479785 344 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNU6-453P-201ENST00000516819 85 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 SCARNA20.6-201ENST00000517251 106 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 AC069114.2-201ENST00000604699 304 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 MIR7112-201ENST00000616126 65 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 MIR622-201ENST00000638396 96 ntBASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
TRBV23-1A0A0A0MS06 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.62□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNU6-275P-201ENST00000364910 107 ntBASIC2.62□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNU6-1228P-201ENST00000391014 107 ntBASIC2.62□□□□□ -1.99
TRBV23-1A0A0A0MS06 AL358944.1-201ENST00000528537 144 ntBASIC2.62□□□□□ -1.99
TRBV23-1A0A0A0MS06 AC108706.1-201ENST00000611053 297 ntBASIC2.62□□□□□ -1.99
TRBV23-1A0A0A0MS06 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.62□□□□□ -1.99
TRBV23-1A0A0A0MS06 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRBV23-1A0A0A0MS06 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
TRBV23-1A0A0A0MS06 Y_RNA.23-201ENST00000362496 106 ntBASIC2.61□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNU6-1019P-201ENST00000364424 107 ntBASIC2.61□□□□□ -1.99
TRBV23-1A0A0A0MS06 RNU6-1080P-201ENST00000383982 107 ntBASIC2.61□□□□□ -1.99
TRBV23-1A0A0A0MS06 SNORD15B-201ENST00000384714 146 ntBASIC2.61□□□□□ -1.99
TRBV23-1A0A0A0MS06 MT-TT-201ENST00000387460 66 ntBASIC2.61□□□□□ -1.99
TRBV23-1A0A0A0MS06 AL606845.1-201ENST00000404881 255 ntBASIC2.61□□□□□ -1.99
TRBV23-1A0A0A0MS06 MIR1278-201ENST00000408753 81 ntBASIC2.61□□□□□ -1.99
TRBV23-1A0A0A0MS06 RN7SKP101-201ENST00000411376 320 ntBASIC2.61□□□□□ -1.99
TRBV23-1A0A0A0MS06 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.61□□□□□ -1.99
TRBV23-1A0A0A0MS06 UQCRHP3-201ENST00000451503 251 ntBASIC2.61□□□□□ -1.99
TRBV23-1A0A0A0MS06 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 223.6 ms