Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 MIR4272-201ENST00000635924 64 ntBASIC1.29□□□□□ -2.2
NANOGQ9H9S0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.28□□□□□ -2.2
NANOGQ9H9S0 snoU2-30.2-201ENST00000362805 70 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.197-201ENST00000364004 102 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 MIR625-201ENST00000385047 85 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 AL355796.1-201ENST00000406706 323 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 AC009310.1-201ENST00000414414 451 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.28□□□□□ -2.2
NANOGQ9H9S0 AC015922.2-201ENST00000435593 184 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.28□□□□□ -2.2
NANOGQ9H9S0 AL137792.2-201ENST00000443484 235 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 UQCRBP2-201ENST00000447827 297 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 PCNPP5-201ENST00000452246 481 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.638-201ENST00000459374 113 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 RNU2-34P-201ENST00000516534 121 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 SUMO2P18-201ENST00000518873 252 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 AL645939.4-201ENST00000604495 135 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 AC010900.2-201ENST00000604508 210 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 U2.1-201ENST00000618978 145 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 U6.92-201ENST00000636464 89 ntBASIC1.28□□□□□ -2.2
NANOGQ9H9S0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
NANOGQ9H9S0 Y_RNA.252-201ENST00000364556 101 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 SNORA4.2-201ENST00000365313 147 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 Y_RNA.395-201ENST00000383945 109 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NANOGQ9H9S0 Y_RNA.595-201ENST00000410403 105 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 Y_RNA.605-201ENST00000410577 105 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 PMCHL1-202ENST00000423102 261 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 RAB28P5-201ENST00000427490 651 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.27□□□□□ -2.21
NANOGQ9H9S0 AC236972.2-201ENST00000434979 310 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 AC009474.2-201ENST00000451383 136 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 NDUFB4P10-201ENST00000452541 359 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 Y_RNA.639-201ENST00000458981 102 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 SNORD65B-201ENST00000459126 73 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 RNA5SP57-201ENST00000459463 123 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 AC114982.1-201ENST00000469402 321 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 AC108729.3-201ENST00000513484 108 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 RNU6-408P-201ENST00000515910 100 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 AL442163.3-201ENST00000554110 156 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 MIR5188-201ENST00000583467 113 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 AL353149.1-201ENST00000610667 244 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
NANOGQ9H9S0 AC091812.1-201ENST00000432235 1948 ntBASIC1.27□□□□□ -2.21
NANOGQ9H9S0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
NANOGQ9H9S0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 Y_RNA.101-201ENST00000363154 102 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 Y_RNA.124-201ENST00000363339 93 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 Y_RNA.216-201ENST00000364205 93 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 Y_RNA.338-201ENST00000365320 114 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 Y_RNA.428-201ENST00000384078 102 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
NANOGQ9H9S0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 MTND1P14-201ENST00000427400 950 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 RNU6-625P-201ENST00000459412 107 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 AC010655.3-201ENST00000478818 450 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 AL163540.1-201ENST00000485382 386 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 AL163195.1-201ENST00000496941 348 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 RNU6-1012P-201ENST00000516606 109 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 RNU6-1153P-201ENST00000516760 105 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 RNU7-4P-201ENST00000516961 62 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 SNORA44.1-201ENST00000517031 108 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 SNORD116.3-201ENST00000517176 78 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 AC006600.1-201ENST00000572529 153 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 MIR4303-201ENST00000581299 66 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 AC016925.2-201ENST00000605108 242 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.26□□□□□ -2.21
NANOGQ9H9S0 AC133104.2-201ENST00000615272 193 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.26□□□□□ -2.21
NANOGQ9H9S0 ZNF209P-201ENST00000593450 2304 ntBASIC1.26□□□□□ -2.21
NANOGQ9H9S0 Y_RNA.112-201ENST00000363250 102 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 RNU6-1240P-201ENST00000365155 104 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 RNU6-203P-201ENST00000384038 104 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 SNORA20B-201ENST00000384220 132 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 RNY3P4-201ENST00000384428 101 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 Y_RNA.498-201ENST00000384460 102 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 SNORA12.1-201ENST00000390873 148 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 RNA5SP109-201ENST00000391010 116 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 RNU4-62P-201ENST00000410125 130 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 RNU6-1199P-201ENST00000411249 104 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.25□□□□□ -2.21
NANOGQ9H9S0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.25□□□□□ -2.21
NANOGQ9H9S0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.25□□□□□ -2.21
NANOGQ9H9S0 AL160004.2-201ENST00000432935 350 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 AC099799.1-201ENST00000439809 192 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 RPS27P1-201ENST00000450552 247 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 RPS29P29-201ENST00000456396 171 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 AC023442.1-201ENST00000531247 422 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 AC023157.2-201ENST00000540596 141 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.25□□□□□ -2.21
NANOGQ9H9S0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.25□□□□□ -2.21
NANOGQ9H9S0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.25□□□□□ -2.21
NANOGQ9H9S0 AC006157.1-201ENST00000611750 366 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 AL021879.1-201ENST00000611756 288 ntBASIC1.25□□□□□ -2.21
NANOGQ9H9S0 AC095038.3-201ENST00000634439 195 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms