Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 AC018710.1-201ENST00000506509 158 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 RNA5SP20-201ENST00000515976 84 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 AC091178.2-201ENST00000584401 117 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 FAM106DP-201ENST00000586416 501 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 AL096861.1-201ENST00000610899 123 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 Z99129.1-201ENST00000612510 255 ntBASIC0.74□□□□□ -2.29
LRRC40Q9H9A6 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 Y_RNA.135-201ENST00000363439 95 ntBASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 RNU6-281P-201ENST00000384212 103 ntBASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 Y_RNA.533-201ENST00000384596 114 ntBASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 MTCYBP4-201ENST00000401524 249 ntBASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 USMG5P1-201ENST00000425964 177 ntBASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 AC245047.8-201ENST00000456455 284 ntBASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 HMGN2P26-201ENST00000463169 339 ntBASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 RNU6-1291P-201ENST00000516591 104 ntBASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 MIR3684-201ENST00000579779 74 ntBASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 NBR2-204ENST00000587322 63 ntBASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 AC004832.4-201ENST00000608952 331 ntBASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
LRRC40Q9H9A6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 Y_RNA.212-201ENST00000364177 102 ntBASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 RNU1-93P-201ENST00000364704 169 ntBASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 RNU6-306P-201ENST00000384617 107 ntBASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 RNU6-780P-201ENST00000391030 104 ntBASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 RPS26P5-201ENST00000418544 335 ntBASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 AC018865.2-201ENST00000423631 129 ntBASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 MTND3P23-201ENST00000431980 347 ntBASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 RNU7-66P-201ENST00000459469 62 ntBASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 AL049830.1-201ENST00000468034 425 ntBASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 AC019235.1-201ENST00000503847 207 ntBASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 RNU6-1114P-201ENST00000516022 107 ntBASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 AC093023.1-201ENST00000547375 507 ntBASIC0.72□□□□□ -2.29
LRRC40Q9H9A6 MIRLET7C-201ENST00000362160 84 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 Y_RNA.256-201ENST00000364594 104 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 RNU4-12P-201ENST00000365233 139 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 RNU6-908P-201ENST00000410160 94 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 FABP5P4-201ENST00000437203 171 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 AC233266.1-201ENST00000454518 96 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 AC046134.1-201ENST00000514454 666 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 SNORD111.1-201ENST00000516421 86 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 MIR4781-201ENST00000585250 76 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 AC242852.1-201ENST00000612151 96 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 AL391903.3-201ENST00000612158 163 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 AC244015.1-201ENST00000622301 99 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 AC023934.1-201ENST00000574529 2389 ntBASIC0.71□□□□□ -2.3
LRRC40Q9H9A6 SNORA27.1-201ENST00000362604 124 ntBASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 SNORD116-11-201ENST00000383882 92 ntBASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 RNU6-332P-201ENST00000391193 108 ntBASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 USP9YP16-201ENST00000430287 407 ntBASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 USP9YP23-201ENST00000455085 407 ntBASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 RNU6-1278P-201ENST00000516130 107 ntBASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 Y_RNA.706-201ENST00000516933 99 ntBASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 RNU6-1116P-201ENST00000517269 99 ntBASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 AC012557.2-201ENST00000605919 418 ntBASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 AC104465.1-201ENST00000611365 139 ntBASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 ZNF299P-201ENST00000406845 1804 ntBASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
LRRC40Q9H9A6 RNU6-222P-201ENST00000362438 107 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 RNU6-595P-201ENST00000363944 107 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 RNU6-1264P-201ENST00000383891 107 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 SNORD116-9-201ENST00000384000 95 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 Y_RNA.414-201ENST00000384011 101 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 SNORD116-3-201ENST00000384287 95 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 SNORD116-7-201ENST00000384404 95 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 SNORD116-5-201ENST00000384462 95 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 RNU1-139P-201ENST00000391307 165 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 MIR891A-201ENST00000401237 79 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 Z98949.2-201ENST00000440996 144 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 SNORA70.12-201ENST00000516084 153 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 AL353765.1-201ENST00000605514 183 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 AC073544.1-201ENST00000600110 1595 ntBASIC0.69□□□□□ -2.3
LRRC40Q9H9A6 RNU6-596P-201ENST00000365395 98 ntBASIC0.68□□□□□ -2.3
LRRC40Q9H9A6 Y_RNA.490-201ENST00000384413 102 ntBASIC0.68□□□□□ -2.3
LRRC40Q9H9A6 MIR526A1-201ENST00000384897 85 ntBASIC0.68□□□□□ -2.3
LRRC40Q9H9A6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.68□□□□□ -2.3
LRRC40Q9H9A6 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.68□□□□□ -2.3
LRRC40Q9H9A6 UQCRBP2-201ENST00000447827 297 ntBASIC0.68□□□□□ -2.3
LRRC40Q9H9A6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.68□□□□□ -2.3
LRRC40Q9H9A6 Y_RNA.688-201ENST00000516565 95 ntBASIC0.68□□□□□ -2.3
LRRC40Q9H9A6 AC090617.3-201ENST00000573670 475 ntBASIC0.68□□□□□ -2.3
LRRC40Q9H9A6 MIR3124-201ENST00000582636 67 ntBASIC0.68□□□□□ -2.3
LRRC40Q9H9A6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
LRRC40Q9H9A6 RNU6-451P-201ENST00000362921 107 ntBASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 RNU6-833P-201ENST00000363486 107 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms