Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 SNORD50.1-201ENST00000362987 71 ntBASIC0.26□□□□□ -2.37
LRRC39Q96DD0 Y_RNA.179-201ENST00000363844 90 ntBASIC0.26□□□□□ -2.37
LRRC39Q96DD0 RNA5SP48-201ENST00000363969 126 ntBASIC0.26□□□□□ -2.37
LRRC39Q96DD0 RNY1P8-201ENST00000383970 114 ntBASIC0.26□□□□□ -2.37
LRRC39Q96DD0 RNU6-541P-201ENST00000384709 110 ntBASIC0.26□□□□□ -2.37
LRRC39Q96DD0 MIR489-201ENST00000384923 84 ntBASIC0.26□□□□□ -2.37
LRRC39Q96DD0 MIR520G-201ENST00000385064 90 ntBASIC0.26□□□□□ -2.37
LRRC39Q96DD0 RNU6-1158P-201ENST00000391167 107 ntBASIC0.26□□□□□ -2.37
LRRC39Q96DD0 MTCYBP4-201ENST00000401524 249 ntBASIC0.26□□□□□ -2.37
LRRC39Q96DD0 AL590002.1-201ENST00000406554 418 ntBASIC0.26□□□□□ -2.37
LRRC39Q96DD0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.26□□□□□ -2.37
LRRC39Q96DD0 MRPS18CP6-201ENST00000423587 223 ntBASIC0.26□□□□□ -2.37
LRRC39Q96DD0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.26□□□□□ -2.37
LRRC39Q96DD0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
LRRC39Q96DD0 MIR15B-201ENST00000385045 98 ntBASIC0.25□□□□□ -2.37
LRRC39Q96DD0 EIF4E2P1-201ENST00000393781 255 ntBASIC0.25□□□□□ -2.37
LRRC39Q96DD0 MIR1827-201ENST00000408549 66 ntBASIC0.25□□□□□ -2.37
LRRC39Q96DD0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.25□□□□□ -2.37
LRRC39Q96DD0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.25□□□□□ -2.37
LRRC39Q96DD0 AC073464.1-201ENST00000429823 534 ntBASIC0.25□□□□□ -2.37
LRRC39Q96DD0 AL358934.1-201ENST00000432346 324 ntBASIC0.25□□□□□ -2.37
LRRC39Q96DD0 AC104383.1-201ENST00000530297 370 ntBASIC0.25□□□□□ -2.37
LRRC39Q96DD0 AC073534.2-201ENST00000620377 381 ntBASIC0.25□□□□□ -2.37
LRRC39Q96DD0 AC100810.6-201ENST00000638068 285 ntBASIC0.25□□□□□ -2.37
LRRC39Q96DD0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.24□□□□□ -2.37
LRRC39Q96DD0 MIRLET7D-201ENST00000362263 87 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 RNU4-45P-201ENST00000365469 141 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 RNU6-128P-201ENST00000383976 107 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 MIR613-201ENST00000385248 95 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 SNORD105-201ENST00000386910 85 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 MIR1185-1-201ENST00000408598 86 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 RNU6-994P-201ENST00000410507 111 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 RNU5A-5P-201ENST00000411054 116 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 RNU6-177P-201ENST00000411257 104 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 RNU6-1278P-201ENST00000516130 107 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 SNORA40.12-201ENST00000516329 111 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.24□□□□□ -2.37
LRRC39Q96DD0 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
LRRC39Q96DD0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.24□□□□□ -2.37
LRRC39Q96DD0 AC120024.3-201ENST00000603167 156 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 Z94722.1-201ENST00000604328 474 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 RNU6-94P-201ENST00000607728 107 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 AC007494.3-201ENST00000624660 743 ntBASIC0.24□□□□□ -2.37
LRRC39Q96DD0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
LRRC39Q96DD0 RNU6-727P-201ENST00000363592 107 ntBASIC0.23□□□□□ -2.37
LRRC39Q96DD0 RNU6-376P-201ENST00000384731 106 ntBASIC0.23□□□□□ -2.37
LRRC39Q96DD0 SNORA26.8-201ENST00000391306 124 ntBASIC0.23□□□□□ -2.37
LRRC39Q96DD0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.23□□□□□ -2.37
LRRC39Q96DD0 RNU6-1208P-201ENST00000459588 107 ntBASIC0.23□□□□□ -2.37
LRRC39Q96DD0 HMGN2P26-201ENST00000463169 339 ntBASIC0.23□□□□□ -2.37
LRRC39Q96DD0 SNORA74.3-201ENST00000517108 154 ntBASIC0.23□□□□□ -2.37
LRRC39Q96DD0 AF235103.2-201ENST00000525753 346 ntBASIC0.23□□□□□ -2.37
LRRC39Q96DD0 AC036111.3-201ENST00000526389 112 ntBASIC0.23□□□□□ -2.37
LRRC39Q96DD0 AC026371.1-201ENST00000551867 419 ntBASIC0.23□□□□□ -2.37
LRRC39Q96DD0 RN7SL793P-201ENST00000583259 296 ntBASIC0.23□□□□□ -2.37
LRRC39Q96DD0 AL121757.2-201ENST00000611223 313 ntBASIC0.23□□□□□ -2.37
LRRC39Q96DD0 AC010487.4-201ENST00000637027 61 ntBASIC0.23□□□□□ -2.37
LRRC39Q96DD0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
LRRC39Q96DD0 Y_RNA.393-201ENST00000383936 102 ntBASIC0.22□□□□□ -2.37
LRRC39Q96DD0 RNU6-38P-201ENST00000384085 107 ntBASIC0.22□□□□□ -2.37
LRRC39Q96DD0 SNORA20B-201ENST00000384220 132 ntBASIC0.22□□□□□ -2.37
LRRC39Q96DD0 MIR140-201ENST00000385282 100 ntBASIC0.22□□□□□ -2.37
LRRC39Q96DD0 SNORD37.1-201ENST00000390968 65 ntBASIC0.22□□□□□ -2.37
LRRC39Q96DD0 RNA5SP511-201ENST00000410487 115 ntBASIC0.22□□□□□ -2.37
LRRC39Q96DD0 ZNF885P-201ENST00000420174 1098 ntBASIC0.22□□□□□ -2.37
LRRC39Q96DD0 Z98949.2-201ENST00000440996 144 ntBASIC0.22□□□□□ -2.37
LRRC39Q96DD0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.22□□□□□ -2.37
LRRC39Q96DD0 AC107401.1-201ENST00000503426 685 ntBASIC0.22□□□□□ -2.37
LRRC39Q96DD0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.22□□□□□ -2.37
LRRC39Q96DD0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.22□□□□□ -2.37
LRRC39Q96DD0 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
LRRC39Q96DD0 AL136370.1-201ENST00000608166 691 ntBASIC0.22□□□□□ -2.37
LRRC39Q96DD0 AC121333.1-201ENST00000567488 2709 ntBASIC0.22□□□□□ -2.37
LRRC39Q96DD0 SNORA25.3-201ENST00000363205 127 ntBASIC0.21□□□□□ -2.38
LRRC39Q96DD0 SNORD113-7-201ENST00000363762 77 ntBASIC0.21□□□□□ -2.38
LRRC39Q96DD0 SNORD113.3-201ENST00000364630 78 ntBASIC0.21□□□□□ -2.38
LRRC39Q96DD0 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
LRRC39Q96DD0 MTCO2P19-201ENST00000427513 598 ntBASIC0.21□□□□□ -2.38
LRRC39Q96DD0 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.21□□□□□ -2.38
LRRC39Q96DD0 RNA5SP20-201ENST00000515976 84 ntBASIC0.21□□□□□ -2.38
LRRC39Q96DD0 RN7SKP164-201ENST00000516138 266 ntBASIC0.21□□□□□ -2.38
LRRC39Q96DD0 AC060788.1-201ENST00000521318 469 ntBASIC0.21□□□□□ -2.38
LRRC39Q96DD0 AC134698.4-201ENST00000523451 826 ntBASIC0.21□□□□□ -2.38
LRRC39Q96DD0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.21□□□□□ -2.38
LRRC39Q96DD0 AC011712.1-201ENST00000588959 234 ntBASIC0.21□□□□□ -2.38
LRRC39Q96DD0 AC009248.2-201ENST00000619826 254 ntBASIC0.21□□□□□ -2.38
LRRC39Q96DD0 AL008636.1-201ENST00000625038 1018 ntBASIC0.21□□□□□ -2.38
LRRC39Q96DD0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.21□□□□□ -2.38
LRRC39Q96DD0 SNORA27.1-201ENST00000362604 124 ntBASIC0.2□□□□□ -2.38
LRRC39Q96DD0 RNU4-41P-201ENST00000364426 143 ntBASIC0.2□□□□□ -2.38
LRRC39Q96DD0 Y_RNA.378-201ENST00000365652 113 ntBASIC0.2□□□□□ -2.38
LRRC39Q96DD0 RNU6-1297P-201ENST00000384415 104 ntBASIC0.2□□□□□ -2.38
LRRC39Q96DD0 RNY1P4-201ENST00000384595 115 ntBASIC0.2□□□□□ -2.38
LRRC39Q96DD0 MIR520C-201ENST00000385005 87 ntBASIC0.2□□□□□ -2.38
LRRC39Q96DD0 AC018865.2-201ENST00000423631 129 ntBASIC0.2□□□□□ -2.38
LRRC39Q96DD0 Z82188.1-201ENST00000436709 154 ntBASIC0.2□□□□□ -2.38
LRRC39Q96DD0 PCNPP5-201ENST00000452246 481 ntBASIC0.2□□□□□ -2.38
LRRC39Q96DD0 SUMO1P2-201ENST00000452524 304 ntBASIC0.2□□□□□ -2.38
LRRC39Q96DD0 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms