Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 MIR7515-201ENST00000637837 67 ntBASIC3.38□□□□□ -1.87
TMEM40Q8WWA1 AC093010.3-201ENST00000570269 15214 ntBASIC3.38□□□□□ -1.87
TMEM40Q8WWA1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.38□□□□□ -1.87
TMEM40Q8WWA1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TMEM40Q8WWA1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.38□□□□□ -1.87
TMEM40Q8WWA1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 RNU1-72P-201ENST00000362976 153 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 RNU6-944P-201ENST00000364023 107 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 MIR218-1-201ENST00000384999 110 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 RNU6-1275P-201ENST00000391087 107 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 MIR300-201ENST00000401138 83 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 SNORA36B-201ENST00000410438 131 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 AL135786.1-201ENST00000415892 214 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 AL139132.1-201ENST00000431587 344 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 Y_RNA.690-201ENST00000516603 95 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 AP003327.1-201ENST00000529684 127 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 MIR3199-1-201ENST00000582434 88 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 MIR4753-201ENST00000585119 83 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 AC025754.2-201ENST00000606491 432 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 AC025166.1-201ENST00000612411 163 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 U7.8-201ENST00000619968 63 ntBASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TMEM40Q8WWA1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM40Q8WWA1 AP003122.5-201ENST00000527668 3766 ntBASIC3.36□□□□□ -1.87
TMEM40Q8WWA1 AC073325.2-201ENST00000339545 159 ntBASIC3.36□□□□□ -1.87
TMEM40Q8WWA1 MIR22-201ENST00000362190 85 ntBASIC3.36□□□□□ -1.87
TMEM40Q8WWA1 RNU6-978P-201ENST00000364371 103 ntBASIC3.36□□□□□ -1.87
TMEM40Q8WWA1 RNA5SP173-201ENST00000364857 136 ntBASIC3.36□□□□□ -1.87
TMEM40Q8WWA1 SNORA79-201ENST00000408376 140 ntBASIC3.36□□□□□ -1.87
TMEM40Q8WWA1 MIR1283-1-201ENST00000408494 87 ntBASIC3.36□□□□□ -1.87
TMEM40Q8WWA1 MICF-203ENST00000432679 129 ntBASIC3.36□□□□□ -1.87
TMEM40Q8WWA1 RPS29P12-201ENST00000460178 152 ntBASIC3.36□□□□□ -1.87
TMEM40Q8WWA1 RNU7-115P-201ENST00000516433 55 ntBASIC3.36□□□□□ -1.87
TMEM40Q8WWA1 RNU6-638P-201ENST00000516582 104 ntBASIC3.36□□□□□ -1.87
TMEM40Q8WWA1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM40Q8WWA1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 MTND5P18-201ENST00000445624 1801 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 RNU6-234P-201ENST00000365229 104 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 RNU6-573P-201ENST00000383938 106 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 SNORA72-201ENST00000384339 132 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 SNORA51.10-201ENST00000384418 136 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 MIRLET7F2-201ENST00000385277 83 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 SNORD72-201ENST00000390994 80 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 MIR1185-2-201ENST00000408687 86 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 RNU6-1328P-201ENST00000410938 106 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 SNORA70.12-201ENST00000516084 153 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 SCARNA3-201ENST00000517097 143 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 MIR4425-201ENST00000580572 84 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 AC105245.1-201ENST00000581934 244 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 AC091178.2-201ENST00000584401 117 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 AC062037.1-201ENST00000605302 128 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 MIR7106-201ENST00000612419 65 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 AP001318.4-201ENST00000616637 121 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 MIR548AY-201ENST00000617669 107 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 SNORA50A-202ENST00000629536 136 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 MIR1245B-201ENST00000636115 69 ntBASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
TMEM40Q8WWA1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TMEM40Q8WWA1 AL365361.1-201ENST00000566942 3481 ntBASIC3.34□□□□□ -1.87
TMEM40Q8WWA1 RNU6-647P-201ENST00000364243 107 ntBASIC3.34□□□□□ -1.87
TMEM40Q8WWA1 Y_RNA.346-201ENST00000365385 112 ntBASIC3.34□□□□□ -1.87
TMEM40Q8WWA1 Y_RNA.361-201ENST00000365515 120 ntBASIC3.34□□□□□ -1.87
TMEM40Q8WWA1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TMEM40Q8WWA1 UBE2DNL-203ENST00000474922 222 ntBASIC3.34□□□□□ -1.87
TMEM40Q8WWA1 AC131055.1-201ENST00000584626 316 ntBASIC3.34□□□□□ -1.87
TMEM40Q8WWA1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.34□□□□□ -1.87
TMEM40Q8WWA1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 Y_RNA.124-201ENST00000363339 93 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 SNORD18B-201ENST00000365659 72 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 Y_RNA.558-201ENST00000384685 113 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 AL603914.1-201ENST00000401964 204 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 EEF1A1P41-201ENST00000414667 207 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 RNU7-57P-201ENST00000459540 60 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 AC010401.1-201ENST00000463867 348 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 AC006483.1-201ENST00000487308 313 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 RPL23AP94-201ENST00000512518 302 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 RNU1-143P-201ENST00000516296 146 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 AC109329.2-201ENST00000519658 482 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 PRELID2P1-201ENST00000552837 301 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 U1.23-201ENST00000610293 146 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 RNU1-68P-201ENST00000615382 146 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.33□□□□□ -1.88
TMEM40Q8WWA1 U1.39-201ENST00000621562 146 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms