Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 Y_RNA.121-201ENST00000363309 113 ntBASIC3.1□□□□□ -1.91
ZNF394Q53GI3 RNU4-13P-201ENST00000364019 141 ntBASIC3.1□□□□□ -1.91
ZNF394Q53GI3 RNU6-1048P-201ENST00000364054 107 ntBASIC3.1□□□□□ -1.91
ZNF394Q53GI3 RNU6-923P-201ENST00000364753 107 ntBASIC3.1□□□□□ -1.91
ZNF394Q53GI3 RNU6-886P-201ENST00000384319 105 ntBASIC3.1□□□□□ -1.91
ZNF394Q53GI3 SNORA44-201ENST00000384584 132 ntBASIC3.1□□□□□ -1.91
ZNF394Q53GI3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.1□□□□□ -1.91
ZNF394Q53GI3 AC018634.1-201ENST00000437554 401 ntBASIC3.1□□□□□ -1.91
ZNF394Q53GI3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF394Q53GI3 ATP5J2P3-201ENST00000451550 258 ntBASIC3.1□□□□□ -1.91
ZNF394Q53GI3 HMGB3P3-201ENST00000510526 400 ntBASIC3.1□□□□□ -1.91
ZNF394Q53GI3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF394Q53GI3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.1□□□□□ -1.91
ZNF394Q53GI3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.1□□□□□ -1.91
ZNF394Q53GI3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF394Q53GI3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF394Q53GI3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF394Q53GI3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
ZNF394Q53GI3 Y_RNA.7-201ENST00000362352 102 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 Y_RNA.172-201ENST00000363765 102 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 RNU1-96P-201ENST00000364163 162 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 SNORA9.2-201ENST00000365361 133 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 RNU6-47P-201ENST00000383866 107 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 MIR181A2-201ENST00000384863 110 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 RNU6-493P-201ENST00000391321 108 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF394Q53GI3 AC107393.1-201ENST00000512403 346 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 RN7SKP164-201ENST00000516138 266 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 RNA5SP137-201ENST00000516833 135 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.09□□□□□ -1.91
ZNF394Q53GI3 AC127455.1-201ENST00000565496 145 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 LARP7P3-201ENST00000579888 337 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 MIR4308-201ENST00000580634 81 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF394Q53GI3 AC134026.1-201ENST00000623249 2239 ntBASIC3.09□□□□□ -1.91
ZNF394Q53GI3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
ZNF394Q53GI3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ZNF394Q53GI3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF394Q53GI3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF394Q53GI3 RNU1-148P-201ENST00000384472 162 ntBASIC3.08□□□□□ -1.92
ZNF394Q53GI3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.08□□□□□ -1.92
ZNF394Q53GI3 COX6CP10-201ENST00000416832 224 ntBASIC3.08□□□□□ -1.92
ZNF394Q53GI3 SUMO1P4-201ENST00000429430 302 ntBASIC3.08□□□□□ -1.92
ZNF394Q53GI3 RPS15AP28-201ENST00000435088 386 ntBASIC3.08□□□□□ -1.92
ZNF394Q53GI3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF394Q53GI3 POLR3GP1-201ENST00000594073 261 ntBASIC3.08□□□□□ -1.92
ZNF394Q53GI3 AC093732.2-201ENST00000607950 274 ntBASIC3.08□□□□□ -1.92
ZNF394Q53GI3 AL359075.3-201ENST00000613288 217 ntBASIC3.08□□□□□ -1.92
ZNF394Q53GI3 U6.106-201ENST00000636360 105 ntBASIC3.08□□□□□ -1.92
ZNF394Q53GI3 MIR338-201ENST00000636369 67 ntBASIC3.08□□□□□ -1.92
ZNF394Q53GI3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
ZNF394Q53GI3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF394Q53GI3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZNF394Q53GI3 AL365361.1-201ENST00000566942 3481 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 RNU1-35P-201ENST00000362782 153 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 SNORD114-6-201ENST00000364393 72 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 U8.7-201ENST00000364940 136 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 RNU6-376P-201ENST00000384731 106 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 MIR626-201ENST00000385032 94 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 AL139132.1-201ENST00000431587 344 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 AP004217.1-201ENST00000480579 346 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 AC117454.1-201ENST00000491120 168 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 RNU7-99P-201ENST00000516271 62 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 RNY3P16-201ENST00000516338 101 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 AC015720.1-201ENST00000565251 277 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 MIR4724-201ENST00000579485 89 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 AL137790.1-201ENST00000634283 177 ntBASIC3.07□□□□□ -1.92
ZNF394Q53GI3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ZNF394Q53GI3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.07□□□□□ -1.92
ZNF394Q53GI3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ZNF394Q53GI3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
ZNF394Q53GI3 MIR367-201ENST00000362299 68 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 Y_RNA.150-201ENST00000363562 102 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 RNU6-103P-201ENST00000363686 107 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 RNU6-682P-201ENST00000363843 106 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 Y_RNA.240-201ENST00000364469 95 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 RNU1-91P-201ENST00000364746 163 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 RNU6-1062P-201ENST00000383908 107 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 SNORA72-201ENST00000384339 132 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 RNU6-417P-201ENST00000384712 107 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 Y_RNA.571-201ENST00000384753 98 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 MIR520G-201ENST00000385064 90 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 SNORA36B-201ENST00000410438 131 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 Z92545.1-201ENST00000411782 234 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.06□□□□□ -1.92
ZNF394Q53GI3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.06□□□□□ -1.92
ZNF394Q53GI3 CST2P1-201ENST00000425770 87 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.06□□□□□ -1.92
ZNF394Q53GI3 Y_RNA.662-201ENST00000516028 97 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 RNU6-1041P-201ENST00000516254 102 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 AC024995.1-201ENST00000523014 93 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 FO624990.1-201ENST00000636373 85 ntBASIC3.06□□□□□ -1.92
ZNF394Q53GI3 RNU6-23P-201ENST00000363283 107 ntBASIC3.05□□□□□ -1.92
ZNF394Q53GI3 RNA5SP493-201ENST00000364115 91 ntBASIC3.05□□□□□ -1.92
ZNF394Q53GI3 Y_RNA.464-201ENST00000384282 110 ntBASIC3.05□□□□□ -1.92
ZNF394Q53GI3 MIR562-201ENST00000384894 95 ntBASIC3.05□□□□□ -1.92
ZNF394Q53GI3 RNU6-381P-201ENST00000391259 108 ntBASIC3.05□□□□□ -1.92
ZNF394Q53GI3 RNA5SP511-201ENST00000410487 115 ntBASIC3.05□□□□□ -1.92
ZNF394Q53GI3 EBAG9P1-201ENST00000418955 543 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms