Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC005786.1-201ENST00000588553 154 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 U2.14-201ENST00000615943 113 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 MIR338-201ENST00000636369 67 ntBASIC2.4□□□□□ -2.03
NKX6-1P78426 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
NKX6-1P78426 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
NKX6-1P78426 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.4□□□□□ -2.03
NKX6-1P78426 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NKX6-1P78426 Y_RNA.124-201ENST00000363339 93 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 Y_RNA.341-201ENST00000365341 102 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 Y_RNA.477-201ENST00000384352 108 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 MIR9-1-201ENST00000385198 89 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 MIR524-201ENST00000385242 87 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 RNA5SP465-201ENST00000391195 109 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 AL138827.1-201ENST00000402666 306 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 RNA5SP21-201ENST00000410917 96 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX6-1P78426 RPS29P6-201ENST00000438196 145 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 AC010409.1-201ENST00000487382 476 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 RPS29P21-201ENST00000496272 170 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 AP005660.1-201ENST00000522972 293 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 RPL21P9-201ENST00000556149 474 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 MIR3128-201ENST00000581957 66 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 MIR5194-201ENST00000582634 120 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX6-1P78426 AC007229.1-201ENST00000590455 412 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 U6.73-201ENST00000619194 103 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 AC064859.1-201ENST00000624741 174 ntBASIC2.39□□□□□ -2.03
NKX6-1P78426 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NKX6-1P78426 UBE2WP1-201ENST00000362030 340 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 MIR26A1-201ENST00000362205 77 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 RNA5SP68-201ENST00000363885 119 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 SNORA3A-201ENST00000364113 130 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 Y_RNA.287-201ENST00000364853 94 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 Y_RNA.456-201ENST00000384232 111 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 MIR504-201ENST00000385065 83 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 RNA5SP323-201ENST00000391094 133 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 AL603910.2-201ENST00000407268 136 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 HMGN2P35-201ENST00000412164 270 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX6-1P78426 RPS15AP28-201ENST00000435088 386 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 snoU13.26-201ENST00000459452 105 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 AC003982.1-202ENST00000469928 248 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX6-1P78426 RNU6-1278P-201ENST00000516130 107 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 RNU6-1023P-201ENST00000516137 106 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 RNU1-41P-201ENST00000516161 162 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 RNU1-48P-201ENST00000516400 162 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 RNU1-104P-201ENST00000517280 175 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.38□□□□□ -2.03
NKX6-1P78426 AC009127.3-201ENST00000570531 403 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 SNORD53-201ENST00000579969 78 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX6-1P78426 BX284668.6-201ENST00000606899 438 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX6-1P78426 MIR6817-201ENST00000615588 66 ntBASIC2.38□□□□□ -2.03
NKX6-1P78426 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NKX6-1P78426 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
NKX6-1P78426 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
NKX6-1P78426 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.37□□□□□ -2.03
NKX6-1P78426 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 U8.2-201ENST00000363156 134 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 RNU1-112P-201ENST00000364401 164 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 DEFA7P-201ENST00000382676 285 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 RNU6-1186P-201ENST00000410429 97 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 CST2P1-201ENST00000425770 87 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 AC018634.1-201ENST00000437554 401 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.37□□□□□ -2.03
NKX6-1P78426 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.37□□□□□ -2.03
NKX6-1P78426 AC096725.1-201ENST00000514266 313 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 Y_RNA.673-201ENST00000516306 88 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 RNA5SP24-201ENST00000516478 95 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 RNU6-1337P-201ENST00000516525 95 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 RNU1-142P-201ENST00000516682 145 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 RNU7-172P-201ENST00000517125 64 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 MIR4524B-201ENST00000581569 115 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 ZNF861P-201ENST00000588126 639 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 AL359075.3-201ENST00000613288 217 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.37□□□□□ -2.03
NKX6-1P78426 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
NKX6-1P78426 Y_RNA.20-201ENST00000362479 113 ntBASIC2.36□□□□□ -2.03
NKX6-1P78426 RNU6-862P-201ENST00000362804 105 ntBASIC2.36□□□□□ -2.03
NKX6-1P78426 SNORD27-201ENST00000363981 72 ntBASIC2.36□□□□□ -2.03
NKX6-1P78426 RNU1-96P-201ENST00000364163 162 ntBASIC2.36□□□□□ -2.03
NKX6-1P78426 Y_RNA.275-201ENST00000364726 110 ntBASIC2.36□□□□□ -2.03
NKX6-1P78426 Y_RNA.368-201ENST00000365547 113 ntBASIC2.36□□□□□ -2.03
NKX6-1P78426 MIR181A2-201ENST00000384863 110 ntBASIC2.36□□□□□ -2.03
NKX6-1P78426 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.36□□□□□ -2.03
NKX6-1P78426 AC097462.1-201ENST00000514125 324 ntBASIC2.36□□□□□ -2.03
NKX6-1P78426 AC136628.3-201ENST00000521868 290 ntBASIC2.36□□□□□ -2.03
NKX6-1P78426 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.36□□□□□ -2.03
NKX6-1P78426 MIR4529-201ENST00000578110 78 ntBASIC2.36□□□□□ -2.03
NKX6-1P78426 MIR3605-201ENST00000583214 100 ntBASIC2.36□□□□□ -2.03
NKX6-1P78426 AL162424.1-201ENST00000602325 221 ntBASIC2.36□□□□□ -2.03
NKX6-1P78426 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.36□□□□□ -2.03
NKX6-1P78426 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.36□□□□□ -2.03
NKX6-1P78426 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.36□□□□□ -2.03
NKX6-1P78426 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms