Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MIR4713-201ENST00000582691 75 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 MIR5701-1-201ENST00000585138 82 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC13P31276 AL078605.1-201ENST00000603529 500 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 MIR5701-2-201ENST00000615634 82 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 MIR376A1-201ENST00000616574 68 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 AC132825.6-201ENST00000638861 357 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 MTND5P9-201ENST00000503854 1755 ntBASIC2.13□□□□□ -2.07
HOXC13P31276 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
HOXC13P31276 RNY1-201ENST00000364228 113 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 Y_RNA.358-201ENST00000365491 99 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 Y_RNA.464-201ENST00000384282 110 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 SNORD115-46-201ENST00000390982 71 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 SNORA26.9-201ENST00000391322 122 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 Y_RNA.602-201ENST00000410535 92 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 RNU2-40P-201ENST00000410833 196 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 MTCO3P29-201ENST00000432119 779 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HOXC13P31276 RNU7-87P-201ENST00000459343 62 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 RNA5SP57-201ENST00000459463 123 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 RPL23AP63-201ENST00000498752 471 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 AC093259.1-201ENST00000509755 300 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.12□□□□□ -2.07
HOXC13P31276 AC067942.3-201ENST00000512025 362 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 SERF1AP1-201ENST00000514575 187 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 RNU6-1338P-201ENST00000516328 91 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 RNU6-567P-201ENST00000516746 107 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 RNU2-44P-201ENST00000516795 194 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 Y_RNA.703-201ENST00000516846 111 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 AC022868.1-201ENST00000517767 391 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 AC024405.2-202ENST00000532731 184 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 AC093023.1-201ENST00000547375 507 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 MIR4300-201ENST00000581016 96 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 BX284668.6-201ENST00000606899 438 ntBASIC2.12□□□□□ -2.07
HOXC13P31276 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.12□□□□□ -2.07
HOXC13P31276 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.12□□□□□ -2.07
HOXC13P31276 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.12□□□□□ -2.07
HOXC13P31276 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HOXC13P31276 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HOXC13P31276 Y_RNA.27-201ENST00000362540 103 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 Y_RNA.99-201ENST00000363138 105 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 Y_RNA.199-201ENST00000364014 102 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 Y_RNA.226-201ENST00000364337 114 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 SNORD32B-201ENST00000364460 84 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 Y_RNA.439-201ENST00000384119 94 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 Y_RNA.541-201ENST00000384640 113 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 SNORD58.1-201ENST00000391313 66 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 MTCYBP2-201ENST00000407745 171 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 RPL23AP36-201ENST00000413895 458 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 COX6CP10-201ENST00000416832 224 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.11□□□□□ -2.07
HOXC13P31276 AC074198.2-201ENST00000508153 258 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.11□□□□□ -2.07
HOXC13P31276 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.11□□□□□ -2.07
HOXC13P31276 MIR5696-201ENST00000578474 85 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 RMST_6.1-201ENST00000611980 203 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 U6.92-201ENST00000636464 89 ntBASIC2.11□□□□□ -2.07
HOXC13P31276 RNU1-58P-201ENST00000362413 163 ntBASIC2.1□□□□□ -2.07
HOXC13P31276 SNORA12-201ENST00000391162 147 ntBASIC2.1□□□□□ -2.07
HOXC13P31276 MTND3P9-201ENST00000429526 346 ntBASIC2.1□□□□□ -2.07
HOXC13P31276 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.1□□□□□ -2.07
HOXC13P31276 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.1□□□□□ -2.07
HOXC13P31276 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.1□□□□□ -2.07
HOXC13P31276 AC025033.1-201ENST00000463883 194 ntBASIC2.1□□□□□ -2.07
HOXC13P31276 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.1□□□□□ -2.07
HOXC13P31276 SNORA25.14-201ENST00000516481 132 ntBASIC2.1□□□□□ -2.07
HOXC13P31276 AP002392.1-201ENST00000537692 208 ntBASIC2.1□□□□□ -2.07
HOXC13P31276 AC021231.3-201ENST00000558497 370 ntBASIC2.1□□□□□ -2.07
HOXC13P31276 AC011476.5-201ENST00000615594 130 ntBASIC2.1□□□□□ -2.07
HOXC13P31276 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HOXC13P31276 AC009541.1-201ENST00000438279 2662 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 Y_RNA.76-201ENST00000362931 109 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 SNORD50.1-201ENST00000362987 71 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 U3.9-201ENST00000363823 204 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 RNA5SP37-201ENST00000365420 130 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 Y_RNA.405-201ENST00000383979 100 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 Y_RNA.451-201ENST00000384200 100 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 RNU6-378P-201ENST00000384324 107 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 RNU6-937P-201ENST00000384325 106 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 Y_RNA.524-201ENST00000384564 100 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 Y_RNA.561-201ENST00000384694 100 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 SNORA26.3-201ENST00000391119 136 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 MIR190B-201ENST00000401119 79 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 MRPL35P1-201ENST00000404272 572 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 AL357139.1-201ENST00000407792 426 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.09□□□□□ -2.07
HOXC13P31276 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.09□□□□□ -2.07
HOXC13P31276 TMSB4XP3-201ENST00000445144 114 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 RPL23AP7-203ENST00000449021 469 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 AL021397.1-201ENST00000451806 248 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 NDUFB4P10-201ENST00000452541 359 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 U8.22-201ENST00000459141 133 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 U8.21-201ENST00000459536 136 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 AC091874.1-201ENST00000511402 339 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.09□□□□□ -2.07
HOXC13P31276 MIR449C-201ENST00000516047 92 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 RNU6-1278P-201ENST00000516130 107 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 Y_RNA.683-201ENST00000516508 93 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 RNU6-861P-201ENST00000516745 106 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 441 ms