Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 MTCO3P19-201ENST00000415864 321 ntBASIC1.84□□□□□ -2.11
CD4P01730 MTCO2P27-201ENST00000420740 428 ntBASIC1.84□□□□□ -2.11
CD4P01730 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.84□□□□□ -2.11
CD4P01730 MRPS10P1-201ENST00000448483 130 ntBASIC1.84□□□□□ -2.11
CD4P01730 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.84□□□□□ -2.11
CD4P01730 RNU6-625P-201ENST00000459412 107 ntBASIC1.84□□□□□ -2.11
CD4P01730 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.84□□□□□ -2.11
CD4P01730 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
CD4P01730 SNORA77B-201ENST00000578179 125 ntBASIC1.84□□□□□ -2.11
CD4P01730 MIR4285-201ENST00000581001 85 ntBASIC1.84□□□□□ -2.11
CD4P01730 MIR4438-201ENST00000585271 93 ntBASIC1.84□□□□□ -2.11
CD4P01730 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CD4P01730 AC100821.1-201ENST00000523153 2479 ntBASIC1.83□□□□□ -2.12
CD4P01730 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CD4P01730 RNA5SP361-201ENST00000362686 118 ntBASIC1.83□□□□□ -2.12
CD4P01730 RNU6-1301P-201ENST00000362724 104 ntBASIC1.83□□□□□ -2.12
CD4P01730 Y_RNA.67-201ENST00000362870 100 ntBASIC1.83□□□□□ -2.12
CD4P01730 SNORA33-201ENST00000363664 130 ntBASIC1.83□□□□□ -2.12
CD4P01730 MIR489-201ENST00000384923 84 ntBASIC1.83□□□□□ -2.12
CD4P01730 MIR1276-201ENST00000408707 83 ntBASIC1.83□□□□□ -2.12
CD4P01730 Y_RNA.592-201ENST00000410274 109 ntBASIC1.83□□□□□ -2.12
CD4P01730 RNU6-1186P-201ENST00000410429 97 ntBASIC1.83□□□□□ -2.12
CD4P01730 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.83□□□□□ -2.12
CD4P01730 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.83□□□□□ -2.12
CD4P01730 SNORA40.9-201ENST00000515895 93 ntBASIC1.83□□□□□ -2.12
CD4P01730 RNU6-507P-201ENST00000516045 100 ntBASIC1.83□□□□□ -2.12
CD4P01730 MIR3674-201ENST00000636576 68 ntBASIC1.83□□□□□ -2.12
CD4P01730 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.82□□□□□ -2.12
CD4P01730 ICE2P2-201ENST00000483823 2787 ntBASIC1.82□□□□□ -2.12
CD4P01730 AC006026.1-201ENST00000444025 1803 ntBASIC1.82□□□□□ -2.12
CD4P01730 RNU6-60P-201ENST00000364792 103 ntBASIC1.82□□□□□ -2.12
CD4P01730 Y_RNA.327-201ENST00000365201 102 ntBASIC1.82□□□□□ -2.12
CD4P01730 RNY4P36-201ENST00000391116 96 ntBASIC1.82□□□□□ -2.12
CD4P01730 RNU1-78P-201ENST00000391248 165 ntBASIC1.82□□□□□ -2.12
CD4P01730 RN7SKP200-201ENST00000410564 320 ntBASIC1.82□□□□□ -2.12
CD4P01730 RNU6-1304P-201ENST00000411374 106 ntBASIC1.82□□□□□ -2.12
CD4P01730 MTATP6P23-201ENST00000440153 476 ntBASIC1.82□□□□□ -2.12
CD4P01730 AC245517.4-201ENST00000448601 281 ntBASIC1.82□□□□□ -2.12
CD4P01730 HSPE1P24-201ENST00000450782 238 ntBASIC1.82□□□□□ -2.12
CD4P01730 RPS27P22-201ENST00000478056 241 ntBASIC1.82□□□□□ -2.12
CD4P01730 RNU6-911P-201ENST00000516523 104 ntBASIC1.82□□□□□ -2.12
CD4P01730 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.82□□□□□ -2.12
CD4P01730 AL355375.2-201ENST00000574825 175 ntBASIC1.82□□□□□ -2.12
CD4P01730 AL162424.1-201ENST00000602325 221 ntBASIC1.82□□□□□ -2.12
CD4P01730 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.82□□□□□ -2.12
CD4P01730 U6.108-201ENST00000637764 58 ntBASIC1.82□□□□□ -2.12
CD4P01730 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CD4P01730 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
CD4P01730 AL391987.6-201ENST00000305671 199 ntBASIC1.81□□□□□ -2.12
CD4P01730 SNORD114-7-201ENST00000362520 77 ntBASIC1.81□□□□□ -2.12
CD4P01730 RNU1-42P-201ENST00000364033 160 ntBASIC1.81□□□□□ -2.12
CD4P01730 RNU6-318P-201ENST00000384283 103 ntBASIC1.81□□□□□ -2.12
CD4P01730 SNORD116-29-201ENST00000384516 83 ntBASIC1.81□□□□□ -2.12
CD4P01730 SNORD12B-201ENST00000410433 91 ntBASIC1.81□□□□□ -2.12
CD4P01730 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.81□□□□□ -2.12
CD4P01730 MTCO3P10-201ENST00000455912 772 ntBASIC1.81□□□□□ -2.12
CD4P01730 U8.22-201ENST00000459141 133 ntBASIC1.81□□□□□ -2.12
CD4P01730 RNU7-34P-201ENST00000459394 64 ntBASIC1.81□□□□□ -2.12
CD4P01730 AC024614.2-201ENST00000577584 372 ntBASIC1.81□□□□□ -2.12
CD4P01730 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.81□□□□□ -2.12
CD4P01730 AC087588.2-201ENST00000617667 426 ntBASIC1.81□□□□□ -2.12
CD4P01730 MTND4LP32-201ENST00000636111 270 ntBASIC1.81□□□□□ -2.12
CD4P01730 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CD4P01730 MTND5P10-201ENST00000603719 1809 ntBASIC1.81□□□□□ -2.12
CD4P01730 RNU6-1123P-201ENST00000362347 106 ntBASIC1.8□□□□□ -2.12
CD4P01730 Y_RNA.529-201ENST00000384586 119 ntBASIC1.8□□□□□ -2.12
CD4P01730 MRPL42P3-201ENST00000401492 326 ntBASIC1.8□□□□□ -2.12
CD4P01730 Y_RNA.605-201ENST00000410577 105 ntBASIC1.8□□□□□ -2.12
CD4P01730 MTND4LP11-201ENST00000422184 280 ntBASIC1.8□□□□□ -2.12
CD4P01730 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.8□□□□□ -2.12
CD4P01730 RAB28P5-201ENST00000427490 651 ntBASIC1.8□□□□□ -2.12
CD4P01730 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.8□□□□□ -2.12
CD4P01730 AC236972.2-201ENST00000434979 310 ntBASIC1.8□□□□□ -2.12
CD4P01730 AC010469.2-201ENST00000496412 480 ntBASIC1.8□□□□□ -2.12
CD4P01730 Y_RNA.718-201ENST00000517110 102 ntBASIC1.8□□□□□ -2.12
CD4P01730 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.8□□□□□ -2.12
CD4P01730 RPL21P9-201ENST00000556149 474 ntBASIC1.8□□□□□ -2.12
CD4P01730 SNORD53B-201ENST00000577887 78 ntBASIC1.8□□□□□ -2.12
CD4P01730 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CD4P01730 AL357075.2-201ENST00000614906 189 ntBASIC1.8□□□□□ -2.12
CD4P01730 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.8□□□□□ -2.12
CD4P01730 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.8□□□□□ -2.12
CD4P01730 MIR126-201ENST00000362291 85 ntBASIC1.79□□□□□ -2.12
CD4P01730 Y_RNA.356-201ENST00000365475 113 ntBASIC1.79□□□□□ -2.12
CD4P01730 RNY3P4-201ENST00000384428 101 ntBASIC1.79□□□□□ -2.12
CD4P01730 MIR628-201ENST00000385229 95 ntBASIC1.79□□□□□ -2.12
CD4P01730 RPL21P1-201ENST00000399532 476 ntBASIC1.79□□□□□ -2.12
CD4P01730 AL161935.2-201ENST00000414627 60 ntBASIC1.79□□□□□ -2.12
CD4P01730 AC245047.3-201ENST00000429428 127 ntBASIC1.79□□□□□ -2.12
CD4P01730 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.79□□□□□ -2.12
CD4P01730 FCF1P4-201ENST00000448326 183 ntBASIC1.79□□□□□ -2.12
CD4P01730 Y_RNA.632-201ENST00000459189 102 ntBASIC1.79□□□□□ -2.12
CD4P01730 AC005908.1-201ENST00000468701 347 ntBASIC1.79□□□□□ -2.12
CD4P01730 RNU6-120P-201ENST00000516077 103 ntBASIC1.79□□□□□ -2.12
CD4P01730 RNU7-128P-201ENST00000517247 62 ntBASIC1.79□□□□□ -2.12
CD4P01730 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.79□□□□□ -2.12
CD4P01730 AL442163.3-201ENST00000554110 156 ntBASIC1.79□□□□□ -2.12
CD4P01730 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.79□□□□□ -2.12
CD4P01730 RNU6-1040P-201ENST00000383974 107 ntBASIC1.78□□□□□ -2.12
CD4P01730 SNORA20B-201ENST00000384220 132 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms