Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RNU1-123P-201ENST00000458950 160 ntBASIC1.22□□□□□ -2.21
TRIM3O75382 RNU6-1053P-201ENST00000515930 101 ntBASIC1.22□□□□□ -2.21
TRIM3O75382 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.22□□□□□ -2.21
TRIM3O75382 AC004584.2-201ENST00000570407 410 ntBASIC1.22□□□□□ -2.21
TRIM3O75382 AC021506.2-201ENST00000612354 169 ntBASIC1.22□□□□□ -2.21
TRIM3O75382 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.22□□□□□ -2.21
TRIM3O75382 AC099654.5-201ENST00000636479 350 ntBASIC1.22□□□□□ -2.21
TRIM3O75382 AL669831.3-213ENST00000636676 183 ntBASIC1.22□□□□□ -2.21
TRIM3O75382 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
TRIM3O75382 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
TRIM3O75382 RNU6-1145P-201ENST00000384246 107 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 RNU6-1031P-201ENST00000384773 107 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 RNU6-440P-201ENST00000390882 105 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 RNU6-321P-201ENST00000410912 106 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 AC092473.1-201ENST00000441098 221 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 MRPS10P1-201ENST00000448483 130 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 RPL30P7-201ENST00000479312 323 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 SUMO2P16-201ENST00000519475 264 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 AP003033.1-201ENST00000527244 415 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 AL365434.2-201ENST00000607979 234 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
TRIM3O75382 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.21□□□□□ -2.22
TRIM3O75382 SNORD33-201ENST00000362761 85 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 RNU6-99P-201ENST00000364721 107 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 SNORA20B-201ENST00000384220 132 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 Y_RNA.498-201ENST00000384460 102 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 AL355796.1-201ENST00000406706 323 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 UBE2V1P7-201ENST00000446395 340 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 AC004223.1-201ENST00000479840 271 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 RPL17P19-201ENST00000489069 552 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.2□□□□□ -2.22
TRIM3O75382 AC116353.2-201ENST00000505332 712 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 AC010598.1-201ENST00000510378 103 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 AC018448.1-201ENST00000552843 316 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 AC005899.2-201ENST00000584353 90 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 AL021879.1-201ENST00000611756 288 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 AC040896.1-201ENST00000613819 479 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 AC104260.1-201ENST00000616660 539 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
TRIM3O75382 AC073544.1-201ENST00000600110 1595 ntBASIC1.2□□□□□ -2.22
TRIM3O75382 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRIM3O75382 RNA5SP327-201ENST00000362494 101 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 SNORD81.2-201ENST00000365153 76 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 RNU6-1264P-201ENST00000383891 107 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 RNU6-318P-201ENST00000384283 103 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 RNU6-950P-201ENST00000384651 107 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 MRPL42P3-201ENST00000401492 326 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 RN7SKP200-201ENST00000410564 320 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 RNU6-370P-201ENST00000411008 104 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 PCNPP5-201ENST00000452246 481 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.19□□□□□ -2.22
TRIM3O75382 AC005840.1-201ENST00000498412 377 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 Y_RNA.691-201ENST00000516611 103 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 AL390123.1-201ENST00000603216 237 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 AC073413.2-201ENST00000604332 360 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 AL157834.3-201ENST00000615543 103 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 TPTEP1-208ENST00000636884 213 ntBASIC1.19□□□□□ -2.22
TRIM3O75382 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TRIM3O75382 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRIM3O75382 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
TRIM3O75382 RNU6-407P-201ENST00000365280 104 ntBASIC1.18□□□□□ -2.22
TRIM3O75382 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
TRIM3O75382 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
TRIM3O75382 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.18□□□□□ -2.22
TRIM3O75382 Y_RNA.635-201ENST00000459041 101 ntBASIC1.18□□□□□ -2.22
TRIM3O75382 MIR2053-201ENST00000459295 91 ntBASIC1.18□□□□□ -2.22
TRIM3O75382 AL133373.1-201ENST00000497098 94 ntBASIC1.18□□□□□ -2.22
TRIM3O75382 TRMT112P2-201ENST00000512910 132 ntBASIC1.18□□□□□ -2.22
TRIM3O75382 RNU7-40P-201ENST00000516397 64 ntBASIC1.18□□□□□ -2.22
TRIM3O75382 RNU6-307P-201ENST00000516743 106 ntBASIC1.18□□□□□ -2.22
TRIM3O75382 CYCSP23-201ENST00000519781 313 ntBASIC1.18□□□□□ -2.22
TRIM3O75382 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.18□□□□□ -2.22
TRIM3O75382 AP002001.1-203ENST00000534002 267 ntBASIC1.18□□□□□ -2.22
TRIM3O75382 CYP3A52P-201ENST00000563326 91 ntBASIC1.18□□□□□ -2.22
TRIM3O75382 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRIM3O75382 AC018630.2-201ENST00000534866 2403 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TRIM3O75382 Y_RNA.166-201ENST00000363730 102 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 RNU6-1065P-201ENST00000384513 106 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 RNU6-310P-201ENST00000384655 107 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 SNORA12.1-201ENST00000390873 148 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 Y_RNA.646-201ENST00000410980 101 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.17□□□□□ -2.22
TRIM3O75382 AC114482.1-201ENST00000418010 247 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 RNU6-625P-201ENST00000459412 107 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 AC082651.2-201ENST00000496833 166 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 SNORA40.9-201ENST00000515895 93 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 RN7SKP49-201ENST00000516675 260 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 RNU7-172P-201ENST00000517125 64 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TRIM3O75382 AC022306.2-201ENST00000617563 647 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TRIM3O75382 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.17□□□□□ -2.22
TRIM3O75382 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms