Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MIR758-201ENST00000390227 88 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-1156P-201ENST00000410365 100 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU6-57P-201ENST00000411348 103 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 RPL30P15-201ENST00000457129 321 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC105758.1-201ENST00000506038 399 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 RNU7-128P-201ENST00000517247 62 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 AL160236.1-201ENST00000556317 195 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 MIR5094-201ENST00000578766 85 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 CYP2C61P-201ENST00000604072 290 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 U1.36-201ENST00000620684 176 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 AL078596.1-201ENST00000624856 447 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 snoZ196.1-201ENST00000625269 89 ntBASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
TMX2-CTNND1H3BSU7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-1115P-201ENST00000362490 106 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.67-201ENST00000362870 100 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU4-73P-201ENST00000363164 141 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU1-22P-201ENST00000363334 158 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNY3P11-201ENST00000364153 102 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 SNORA63D-201ENST00000364359 132 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.315-201ENST00000365117 102 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.463-201ENST00000384271 102 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNY1P14-201ENST00000384426 108 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.509-201ENST00000384506 99 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-700P-201ENST00000391043 107 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 MIR320B2-201ENST00000408479 138 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.592-201ENST00000410274 109 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.653-201ENST00000459091 95 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 MTND3P22-201ENST00000510932 243 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNA5SP445-201ENST00000515889 115 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 SNORA31.17-201ENST00000516953 127 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNA5SP437-201ENST00000517249 129 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC008269.2-201ENST00000561915 1105 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 C8orf59P2-201ENST00000603441 271 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 7SK.7-201ENST00000603504 247 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC080078.3-201ENST00000605407 463 ntBASIC1.21□□□□□ -2.22
TMX2-CTNND1H3BSU7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 MIR410-201ENST00000362222 80 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.5-201ENST00000362334 102 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 snoU2-30.2-201ENST00000362805 70 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.187-201ENST00000363918 113 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-454P-201ENST00000364292 107 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.259-201ENST00000364619 101 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 SNORD114-22-201ENST00000365423 72 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.356-201ENST00000365475 113 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 MIR30A-201ENST00000385092 71 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC092423.1-201ENST00000430165 186 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 RPL26P26-201ENST00000480251 434 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 Y_RNA.683-201ENST00000516508 93 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 RN7SKP49-201ENST00000516675 260 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-699P-201ENST00000517081 110 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 MIR4795-201ENST00000584182 89 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC104985.2-201ENST00000620598 500 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 AL359697.1-201ENST00000624879 587 ntBASIC1.2□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-490P-201ENST00000362985 107 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU1-96P-201ENST00000364163 162 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-1040P-201ENST00000383974 107 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-439P-201ENST00000384188 106 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-708P-201ENST00000384217 107 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNA5SP467-201ENST00000391274 118 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 MTND4LP11-201ENST00000422184 280 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 SDAD1P3-201ENST00000427380 333 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC093019.1-201ENST00000443135 252 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 RPS27P1-201ENST00000450552 247 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU7-87P-201ENST00000459343 62 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC114982.1-201ENST00000469402 321 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-307P-201ENST00000516743 106 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC055872.1-201ENST00000570978 278 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC006001.4-201ENST00000622243 395 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.19□□□□□ -2.22
TMX2-CTNND1H3BSU7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-338P-201ENST00000383888 105 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 SNORD26-201ENST00000384147 75 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 RNU6-417P-201ENST00000384712 107 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 AL355796.1-201ENST00000406706 323 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 AC018865.2-201ENST00000423631 129 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 CST2P1-201ENST00000425770 87 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 MTND4P28-201ENST00000426217 387 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 AL606517.2-201ENST00000442855 241 ntBASIC1.18□□□□□ -2.22
TMX2-CTNND1H3BSU7 PCNPP5-201ENST00000452246 481 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms