Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 AC011266.1-201ENST00000624119 3569 ntBASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC61Q9Y6R9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC61Q9Y6R9 Y_RNA.299-201ENST00000364973 94 ntBASIC5.11□□□□□ -1.59
CCDC61Q9Y6R9 U8.15-201ENST00000390947 134 ntBASIC5.11□□□□□ -1.59
CCDC61Q9Y6R9 RNA5SP424-201ENST00000390988 115 ntBASIC5.11□□□□□ -1.59
CCDC61Q9Y6R9 MIR1253-201ENST00000408273 105 ntBASIC5.11□□□□□ -1.59
CCDC61Q9Y6R9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC61Q9Y6R9 RNA5SP208-201ENST00000516156 78 ntBASIC5.11□□□□□ -1.59
CCDC61Q9Y6R9 RNU7-25P-201ENST00000516544 62 ntBASIC5.11□□□□□ -1.59
CCDC61Q9Y6R9 AC006441.5-201ENST00000612680 209 ntBASIC5.11□□□□□ -1.59
CCDC61Q9Y6R9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC61Q9Y6R9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC61Q9Y6R9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCDC61Q9Y6R9 UBE3AP2-201ENST00000429033 2259 ntBASIC5.11□□□□□ -1.59
CCDC61Q9Y6R9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 RNU6-1279P-201ENST00000383917 103 ntBASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 RNU6-1201P-201ENST00000384227 107 ntBASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 RNU6-616P-201ENST00000384353 107 ntBASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 AL445646.1-201ENST00000431784 216 ntBASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 AL353813.1-201ENST00000440700 253 ntBASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC5.1□□□□□ -1.59
CCDC61Q9Y6R9 AC018630.2-201ENST00000534866 2403 ntBASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 SCN1A-220ENST00000641603 12506 ntBASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 RPS15AP28-201ENST00000435088 386 ntBASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 AC078918.1-201ENST00000498515 228 ntBASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 AC004812.1-201ENST00000540773 146 ntBASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 ELOCP29-201ENST00000588193 334 ntBASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 AC078899.2-201ENST00000595282 212 ntBASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 HSPE1P19-201ENST00000603327 295 ntBASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 U7.4-201ENST00000614961 63 ntBASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC61Q9Y6R9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC61Q9Y6R9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.09□□□□□ -1.6
CCDC61Q9Y6R9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CCDC61Q9Y6R9 RNU6-442P-201ENST00000383968 104 ntBASIC5.08□□□□□ -1.6
CCDC61Q9Y6R9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC61Q9Y6R9 RN7SKP200-201ENST00000410564 320 ntBASIC5.08□□□□□ -1.6
CCDC61Q9Y6R9 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.08□□□□□ -1.6
CCDC61Q9Y6R9 DBIP2-201ENST00000419076 262 ntBASIC5.08□□□□□ -1.6
CCDC61Q9Y6R9 AC006445.1-201ENST00000491925 405 ntBASIC5.08□□□□□ -1.6
CCDC61Q9Y6R9 RNU6-1291P-201ENST00000516591 104 ntBASIC5.08□□□□□ -1.6
CCDC61Q9Y6R9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC61Q9Y6R9 AC027290.2-201ENST00000623210 18662 ntBASIC5.08□□□□□ -1.6
CCDC61Q9Y6R9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC61Q9Y6R9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC61Q9Y6R9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC61Q9Y6R9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC61Q9Y6R9 RNA5SP144-201ENST00000410846 116 ntBASIC5.07□□□□□ -1.6
CCDC61Q9Y6R9 FTH1P12-201ENST00000432137 551 ntBASIC5.07□□□□□ -1.6
CCDC61Q9Y6R9 AP003484.1-201ENST00000530974 250 ntBASIC5.07□□□□□ -1.6
CCDC61Q9Y6R9 uc_338.14-201ENST00000613162 166 ntBASIC5.07□□□□□ -1.6
CCDC61Q9Y6R9 AC095038.3-201ENST00000634439 195 ntBASIC5.07□□□□□ -1.6
CCDC61Q9Y6R9 AP000553.6-201ENST00000641242 118 ntBASIC5.07□□□□□ -1.6
CCDC61Q9Y6R9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC61Q9Y6R9 IPO8P1-201ENST00000455509 3109 ntBASIC5.07□□□□□ -1.6
CCDC61Q9Y6R9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC61Q9Y6R9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 Y_RNA.547-201ENST00000384654 119 ntBASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 MIR1183-201ENST00000408856 89 ntBASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 AC009414.1-201ENST00000427200 443 ntBASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 AL035398.1-201ENST00000430869 322 ntBASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 AP002884.2-201ENST00000471647 395 ntBASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 Vault.1-201ENST00000516474 102 ntBASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 AC008264.2-201ENST00000610193 3731 ntBASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC61Q9Y6R9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC61Q9Y6R9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC61Q9Y6R9 RNA5SP50-201ENST00000363731 107 ntBASIC5.05□□□□□ -1.6
CCDC61Q9Y6R9 RNA5SP146-201ENST00000410743 123 ntBASIC5.05□□□□□ -1.6
CCDC61Q9Y6R9 AL512326.2-201ENST00000426359 151 ntBASIC5.05□□□□□ -1.6
CCDC61Q9Y6R9 AC091544.4-201ENST00000555268 342 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms